RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 NKRFO15226 690 aaKnown RBP eCLIP13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 KPNA6O60684 536 aa13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 CPT1AP50416 773 aa13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 ALDH5A1P51649 535 aaPredicted RBP13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 SNAP25P60880 206 aa13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 PSMC6P62333 389 aa13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 CCDC85BQ15834 202 aaPredicted RBP13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 BRDTQ58F21 947 aaPredicted RBP13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 TICAM2Q86XR7 235 aa13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 ADAMTS19Q8TE59 1207 aa13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 TCP11L1Q9NUJ3 509 aa13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 SCN10AQ9Y5Y9 1956 aa13.61□□□□□ -0.23
EXOSC1-207ENST00000474309 FOXP2O15409 715 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 RANBP6O60518 1105 aaKnown RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 NMT2O60551 498 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 RFC2P35250 354 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 RABGGTBP53611 331 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 PURAQ00577 322 aaKnown RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 PTPN11Q06124 597 aaPredicted RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 TMEM63BQ5T3F8 832 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 PPP2R2DQ66LE6 453 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 IL27Q8NEV9 243 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 SCLYQ96I15 445 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 UHRF1Q96T88 793 aaPredicted RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 MTG1Q9BT17 334 aaPredicted RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 MAF1Q9H063 256 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 INCENPQ9NQS7 918 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 GPHNQ9NQX3 736 aaPredicted RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 DDX49Q9Y6V7 483 aaKnown RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 LCTP09848 1927 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 CHD9Q3L8U1 2897 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 TNKSO95271 1327 aa13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 TRIP12Q14669 1992 aaPredicted RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 TCF20Q9UGU0 1960 aaKnown RBP13.6□□□□□ -0.23
EXOSC1-207ENST00000474309 ZBBXA8MT70 800 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 B4DLN1 442 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 TOP1P11387 765 aaKnown RBP13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 ACTN1P12814 892 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 BMP1P13497 986 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 PTGS1P23219 599 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 MRPL12P52815 198 aaKnown RBP13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 AAK1Q2M2I8 961 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 CCDC96Q2M329 555 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 TMEM67Q5HYA8 995 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 SYDE2Q5VT97 1194 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 TTBK2Q6IQ55 1244 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 NFRKBQ6P4R8 1299 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 DNERQ8NFT8 737 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 CHMP4CQ96CF2 233 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 TTC14Q96N46 770 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 PURBQ96QR8 312 aaKnown RBP13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 MPHOSPH6Q99547 160 aaKnown RBP13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 HELLSQ9NRZ9 838 aa13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 TRMT13Q9NUP7 481 aaKnown RBP13.59□□□□□ -0.23
EXOSC1-207ENST00000474309 TET1Q8NFU7 2136 aa13.58□□□□□ -0.23
EXOSC1-207ENST00000474309 A6NJR5 290 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 CYP2C9P11712 490 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 MX1P20591 662 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 EDNRBP24530 442 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 SLC16A2P36021 539 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 TTLL4Q14679 1199 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 NBPF20Q3BBV1 942 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 RETREG2Q8NC44 543 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 OR6J1Q8NGC5 347 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 CLEC4DQ8WXI8 215 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 EVI5LQ96CN4 794 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 SLC9A7Q96T83 725 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 LRRC37A2A6NM11 1700 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 RAD50Q92878 1312 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 CHD7Q9P2D1 2997 aa13.58□□□□□ -0.24
EXOSC1-207ENST00000474309 PTPDC1A2A3K4 754 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 KIF28PB7ZC32 967 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 NFIBO00712 420 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 MYL3P08590 195 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 MYOGP15173 224 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 RNF207Q6ZRF8 634 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 OTUD7AQ8TE49 926 aaPredicted RBP13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 MTMR7Q9Y216 660 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 SCN5AQ14524 2016 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 WDR19Q8NEZ3 1342 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 SALL3Q9BXA9 1300 aa13.57□□□□□ -0.24
EXOSC1-207ENST00000474309 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
EXOSC1-207ENST00000474309 FGAP02671 866 aa13.56□□□□□ -0.24
EXOSC1-207ENST00000474309 PDHBP11177 359 aa13.56□□□□□ -0.24
EXOSC1-207ENST00000474309 PCP11498 1178 aaKnown RBP13.56□□□□□ -0.24
EXOSC1-207ENST00000474309 RPS6P62753 249 aaKnown RBP13.56□□□□□ -0.24
EXOSC1-207ENST00000474309 PDE4DQ08499 809 aa13.56□□□□□ -0.24
EXOSC1-207ENST00000474309 BFSP2Q13515 415 aa13.56□□□□□ -0.24
EXOSC1-207ENST00000474309 PPP2R5BQ15173 497 aa13.56□□□□□ -0.24
EXOSC1-207ENST00000474309 VPS53Q5VIR6 699 aa13.56□□□□□ -0.24
EXOSC1-207ENST00000474309 RASGRP2Q7LDG7 609 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms