RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.02□□□□□ -0.33
CKS1B-206ENST00000474215 A0A1W2PPC1 479 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 MOXD2PA6NHM9 499 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 PRC1O43663 620 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 CDC45O75419 566 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 CST5P28325 142 aaPredicted RBP13.02□□□□□ -0.33
CKS1B-206ENST00000474215 MCM5P33992 734 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 MAGEA10P43363 369 aaPredicted RBP13.02□□□□□ -0.33
CKS1B-206ENST00000474215 FXR1P51114 621 aaKnown RBP eCLIP13.02□□□□□ -0.33
CKS1B-206ENST00000474215 NKX3-2P78367 333 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 TRIM60Q495X7 471 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 MCF2L2Q86YR7 1114 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 DNERQ8NFT8 737 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 TBC1D5Q92609 795 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 MTMR8Q96EF0 704 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 MPHOSPH6Q99547 160 aaKnown RBP13.02□□□□□ -0.33
CKS1B-206ENST00000474215 AMNQ9BXJ7 453 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 PRKAG2Q9UGJ0 569 aa13.02□□□□□ -0.33
CKS1B-206ENST00000474215 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.33
CKS1B-206ENST00000474215 MRPL11Q9Y3B7 192 aaKnown RBP13.02□□□□□ -0.33
CKS1B-206ENST00000474215 RANBP2P49792 3224 aaKnown RBP13.01□□□□□ -0.33
CKS1B-206ENST00000474215 MYADML2A6NDP7 307 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 B4DLN1 442 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 ZBTB5O15062 677 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 ASGR1P07306 291 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 SMPD1P17405 629 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 MRPL12P52815 198 aaKnown RBP13.01□□□□□ -0.33
CKS1B-206ENST00000474215 IRX5P78411 483 aaPredicted RBP13.01□□□□□ -0.33
CKS1B-206ENST00000474215 TLE2Q04725 743 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 PDE4DQ08499 809 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 RNF20Q5VTR2 975 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
CKS1B-206ENST00000474215 TMEM87BQ96K49 555 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 AP5M1Q9H0R1 490 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 RIOX1Q9H6W3 641 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 LY9Q9HBG7 655 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
CKS1B-206ENST00000474215 STARD7Q9NQZ5 370 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 Q9Y3F1 56 aa13.01□□□□□ -0.33
CKS1B-206ENST00000474215 ELP1O95163 1332 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 RBM47A0AV96 593 aaKnown RBP13□□□□□ -0.33
CKS1B-206ENST00000474215 CTAGE5O15320 804 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 DYNC1LI2O43237 492 aaPredicted RBP13□□□□□ -0.33
CKS1B-206ENST00000474215 PPP1R11O60927 126 aaPredicted RBP13□□□□□ -0.33
CKS1B-206ENST00000474215 EDNRBP24530 442 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 TRAF1Q13077 416 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 SLC35G1Q2M3R5 365 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 TLK2Q86UE8 772 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 SYTL5Q8TDW5 730 aaPredicted RBP13□□□□□ -0.33
CKS1B-206ENST00000474215 VTI1AQ96AJ9 217 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 GLT1D1Q96MS3 346 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 MAP3K14Q99558 947 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 LBHD1Q9BQE6 289 aaPredicted RBP13□□□□□ -0.33
CKS1B-206ENST00000474215 UBE2OQ9C0C9 1292 aaKnown RBP13□□□□□ -0.33
CKS1B-206ENST00000474215 RNF216Q9NWF9 866 aaPredicted RBP13□□□□□ -0.33
CKS1B-206ENST00000474215 PCDHA1Q9Y5I3 950 aa13□□□□□ -0.33
CKS1B-206ENST00000474215 MDM2Q00987 491 aaPredicted RBP12.99□□□□□ -0.33
CKS1B-206ENST00000474215 BEX3Q00994 111 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 COL9A3Q14050 684 aaPredicted RBP12.99□□□□□ -0.33
CKS1B-206ENST00000474215 FSCN1Q16658 493 aaKnown RBP12.99□□□□□ -0.33
CKS1B-206ENST00000474215 DUSP28Q4G0W2 176 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 TMEM63BQ5T3F8 832 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 HOMER1Q86YM7 354 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 ZNF654Q8IZM8 581 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
CKS1B-206ENST00000474215 TAAR1Q96RJ0 339 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 PIGSQ96S52 555 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 WDR11Q9BZH6 1224 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
CKS1B-206ENST00000474215 PNMA6FA0A0J9YX94 578 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
CKS1B-206ENST00000474215 OPLAHO14841 1288 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 CYTH3O43739 400 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 PQBP1O60828 265 aaKnown RBP12.98□□□□□ -0.33
CKS1B-206ENST00000474215 DDAH1O94760 285 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 CFBP00751 764 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 KIF5BP33176 963 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 LIFRP42702 1097 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 CDK7P50613 346 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 HSD17B4P51659 736 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 TSGA10IPQ3SY00 556 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 ANKRD33Q7Z3H0 272 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 SH3RF1Q7Z6J0 888 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 CTCFLQ8NI51 663 aaPredicted RBP12.98□□□□□ -0.33
CKS1B-206ENST00000474215 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 TOX2Q96NM4 488 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 IWS1Q96ST2 819 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 RMDN3Q96TC7 470 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 MYL10Q9BUA6 226 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 PRDM5Q9NQX1 630 aaPredicted RBP12.98□□□□□ -0.33
CKS1B-206ENST00000474215 PDLIM7Q9NR12 457 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 MAP3K20Q9NYL2 800 aaKnown RBP12.98□□□□□ -0.33
CKS1B-206ENST00000474215 COL20A1Q9P218 1284 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 MCM3APO60318 1980 aa12.98□□□□□ -0.33
CKS1B-206ENST00000474215 TRIM43BA6NCK2 446 aa12.97□□□□□ -0.33
CKS1B-206ENST00000474215 DCDC2CA8MYV0 355 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms