RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TXLNAP40222 546 aa20.36■□□□□ 0.85
VARS2-206ENST00000473916 STAT6P42226 847 aa20.36■□□□□ 0.85
VARS2-206ENST00000473916 CUL4BQ13620 913 aa20.36■□□□□ 0.85
VARS2-206ENST00000473916 DLK2Q6UY11 383 aa20.36■□□□□ 0.85
VARS2-206ENST00000473916 SYT17Q9BSW7 474 aa20.36■□□□□ 0.85
VARS2-206ENST00000473916 MMTAG2Q9BU76 263 aaKnown RBP20.36■□□□□ 0.85
VARS2-206ENST00000473916 UBA7P41226 1012 aa20.36■□□□□ 0.85
VARS2-206ENST00000473916 FAM43AQ8N2R8 423 aa20.36■□□□□ 0.85
VARS2-206ENST00000473916 RASSF8Q8NHQ8 419 aa20.36■□□□□ 0.85
VARS2-206ENST00000473916 DDX25Q9UHL0 483 aaKnown RBP20.36■□□□□ 0.85
VARS2-206ENST00000473916 FMR1Q06787 632 aaKnown RBP eCLIP20.35■□□□□ 0.85
VARS2-206ENST00000473916 HS1BP3Q53T59 392 aa20.35■□□□□ 0.85
VARS2-206ENST00000473916 SARM1Q6SZW1 724 aa20.35■□□□□ 0.85
VARS2-206ENST00000473916 SMYD4Q8IYR2 804 aaPredicted RBP20.35■□□□□ 0.85
VARS2-206ENST00000473916 TBC1D5Q92609 795 aa20.35■□□□□ 0.85
VARS2-206ENST00000473916 HAS1Q92839 578 aa20.35■□□□□ 0.85
VARS2-206ENST00000473916 ZKSCAN4Q969J2 545 aaPredicted RBP20.35■□□□□ 0.85
VARS2-206ENST00000473916 CCSER1Q9C0I3 900 aa20.35■□□□□ 0.85
VARS2-206ENST00000473916 SH2D4AQ9H788 454 aa20.35■□□□□ 0.85
VARS2-206ENST00000473916 SSC5DA1L4H1 1573 aa20.35■□□□□ 0.85
VARS2-206ENST00000473916 POTEMA6NI47 508 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 CTNND1O60716 968 aaKnown RBP20.34■□□□□ 0.85
VARS2-206ENST00000473916 PPP4R3AQ6IN85 833 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 CABP7Q86V35 215 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 IGSF22Q8N9C0 903 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 RANBP17Q9H2T7 1088 aaKnown RBP20.34■□□□□ 0.85
VARS2-206ENST00000473916 ATP1A3P13637 1013 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 PLCG1P19174 1290 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 LMOD1P29536 600 aaPredicted RBP20.34■□□□□ 0.85
VARS2-206ENST00000473916 ORC2Q13416 577 aaPredicted RBP20.34■□□□□ 0.85
VARS2-206ENST00000473916 RRAGBQ5VZM2 374 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 ZSCAN30Q86W11 494 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 TRMT44Q8IYL2 757 aaKnown RBP20.34■□□□□ 0.85
VARS2-206ENST00000473916 MED15Q96RN5 788 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 RNF181Q9P0P0 153 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 NRBP1Q9UHY1 535 aa20.34■□□□□ 0.85
VARS2-206ENST00000473916 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.34■□□□□ 0.85
VARS2-206ENST00000473916 PHIPQ8WWQ0 1821 aa20.33■□□□□ 0.85
VARS2-206ENST00000473916 SMC2O95347 1197 aa20.33■□□□□ 0.85
VARS2-206ENST00000473916 CD44P16070 742 aaKnown RBP20.33■□□□□ 0.85
VARS2-206ENST00000473916 MTMR2Q13614 643 aa20.33■□□□□ 0.85
VARS2-206ENST00000473916 CHURC1Q8WUH1 139 aa20.33■□□□□ 0.85
VARS2-206ENST00000473916 GLT8D2Q9H1C3 349 aa20.33■□□□□ 0.85
VARS2-206ENST00000473916 TTC12Q9H892 705 aaPredicted RBP20.33■□□□□ 0.85
VARS2-206ENST00000473916 APOBEC3FQ8IUX4 373 aaKnown RBP20.32■□□□□ 0.84
VARS2-206ENST00000473916 CRYGNQ8WXF5 182 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 AK8Q96MA6 479 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 WRNIP1Q96S55 665 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 IKBKBO14920 756 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 ARHGAP4P98171 946 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 MYL5Q02045 173 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 HSP90AA4PQ58FG1 418 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 NUDT12Q9BQG2 462 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 FEM1BQ9UK73 627 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 PARP14Q460N5 1801 aa20.32■□□□□ 0.84
VARS2-206ENST00000473916 GTPBP6O43824 516 aaPredicted RBP20.31■□□□□ 0.84
VARS2-206ENST00000473916 FXR2P51116 673 aaKnown RBP eCLIP20.31■□□□□ 0.84
VARS2-206ENST00000473916 AP3B2Q13367 1082 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 FCHSD1Q86WN1 690 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 TRIML1Q8N9V2 468 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 CCDC34Q96HJ3 373 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 PYM1Q9BRP8 204 aaKnown RBP20.31■□□□□ 0.84
VARS2-206ENST00000473916 PRKG1Q13976 671 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 FAM160B2Q86V87 743 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 MLKLQ8NB16 471 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 AGBL1Q96MI9 1066 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 GSDMAQ96QA5 445 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 KIAA1683Q9H0B3 1180 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 EMILIN3Q9NT22 766 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 FANCLQ9NW38 375 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 LRWD1Q9UFC0 647 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 ZKSCAN5Q9Y2L8 839 aa20.31■□□□□ 0.84
VARS2-206ENST00000473916 SMTNL1A8MU46 457 aa20.3■□□□□ 0.84
VARS2-206ENST00000473916 PLA2G6O60733 806 aa20.3■□□□□ 0.84
VARS2-206ENST00000473916 CFBP00751 764 aa20.3■□□□□ 0.84
VARS2-206ENST00000473916 DRC7Q8IY82 874 aa20.3■□□□□ 0.84
VARS2-206ENST00000473916 ZNF112Q9UJU3 913 aa20.3■□□□□ 0.84
VARS2-206ENST00000473916 SPDYE3A6NKU9 549 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 COBLO75128 1261 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 PTGS1P23219 599 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 SPP2Q13103 211 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 GRB10Q13322 594 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 CCDC144BQ3MJ40 725 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 DCAF15Q66K64 600 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 KLHL10Q6JEL2 608 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 LDHDQ86WU2 507 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 SCYL3Q8IZE3 742 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 PNMA5Q96PV4 448 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 KCNF1Q9H3M0 494 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 ZNF536O15090 1300 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 FAM86B1E9PN63 330 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 FAM86B2P0C5J1 330 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 GCFC2P16383 781 aaKnown RBP20.29■□□□□ 0.84
VARS2-206ENST00000473916 VCAM1P19320 739 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 USP11P51784 963 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 TMEM266Q2M3C6 531 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 CYP2W1Q8TAV3 490 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 TANGO6Q9C0B7 1094 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 KBTBD4Q9NVX7 518 aa20.29■□□□□ 0.84
VARS2-206ENST00000473916 IFNKQ9P0W0 207 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms