RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 RPS6P62753 249 aaKnown RBP9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 SEC23AQ15436 765 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 STXBP2Q15833 593 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 KCNA10Q16322 511 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 LRRC26Q2I0M4 334 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 ARHGEF16Q5VV41 709 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 CREB3L3Q68CJ9 461 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 CYB5R4Q7L1T6 521 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 EEPD1Q7L9B9 569 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 CHST3Q7LGC8 479 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 CUL5Q93034 780 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 RRP36Q96EU6 259 aaKnown RBP9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 NEK1Q96PY6 1258 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 IWS1Q96ST2 819 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 UBE2OQ9C0C9 1292 aaKnown RBP9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 PRDM5Q9NQX1 630 aaPredicted RBP9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 PPP4R2Q9NY27 417 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 ELP1O95163 1332 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 CEP290O15078 2479 aa9.71□□□□□ -0.86
TSPAN1-205ENST00000472170 SZT2Q5T011 3432 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 PNMA6FA0A0J9YX94 578 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 PALM3A6NDB9 673 aaPredicted RBP9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 SOWAHBA6NEL2 793 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 NFIBO00712 420 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 KPNA6O60684 536 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 DDAH1O94760 285 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 SYN1P17600 705 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 PSMA5P28066 241 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 BMP8BP34820 402 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 MNX1P50219 401 aaPredicted RBP9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 CPT1AP50416 773 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 GJA9P57773 515 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 TTLL4Q14679 1199 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 GRM4Q14833 912 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 NECTIN1Q15223 517 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 QRICH1Q2TAL8 776 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 C1orf53Q5VUE5 145 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 KCNV1Q6PIU1 500 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 HOMER1Q86YM7 354 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 IGDCC4Q8TDY8 1250 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 SCFD2Q8WU76 684 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 WDR11Q9BZH6 1224 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 LSG1Q9H089 658 aaKnown RBP9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 IL25Q9H293 177 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 JMJD4Q9H9V9 463 aa9.7□□□□□ -0.86
TSPAN1-205ENST00000472170 A0A0C4DFX4 3053 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 A0A0U1RQG5 324 aaPredicted RBP9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 A0A1W2PQ45 241 aaPredicted RBP9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 A0A1W2PQY0 241 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 GCOM1H8Y6P7 765 aaPredicted RBP9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 MCM3APO60318 1980 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 ASGR1P07306 291 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 POLR2MP0CAP2 368 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 CST5P28325 142 aaPredicted RBP9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 LIFRP42702 1097 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 PPP2R5BQ15173 497 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 FSCN1Q16658 493 aaKnown RBP9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 DUSP28Q4G0W2 176 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 DHX32Q7L7V1 743 aaKnown RBP9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 RASGRP2Q7LDG7 609 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 TLK2Q86UE8 772 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 CLEC4DQ8WXI8 215 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 TOX2Q96NM4 488 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 RMDN3Q96TC7 470 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 TMEM39AQ9NV64 488 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 POLR3EQ9NVU0 708 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 MAD2L2Q9UI95 211 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 NAP1L2Q9ULW6 460 aaPredicted RBP9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 SYNRGQ9UMZ2 1314 aa9.69□□□□□ -0.86
TSPAN1-205ENST00000472170 CCDC196A0A1B0GTZ2 297 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 PQBP1O60828 265 aaKnown RBP9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 ADAMTS4O75173 837 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 EIF3JO75822 258 aaKnown RBP9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 CLTBP09497 229 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 TXNP10599 105 aaKnown RBP9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 RAG1P15918 1043 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 TROAPQ12815 778 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 TRIM60Q495X7 471 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 FBXO16Q8IX29 292 aaPredicted RBP9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 MB21D2Q8IYB1 491 aaPredicted RBP9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 ZNF654Q8IZM8 581 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 STAG2Q8N3U4 1231 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 KLHDC9Q8NEP7 349 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 SMARCC2Q8TAQ2 1214 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 MORC4Q8TE76 937 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 UPF3AQ9H1J1 476 aaKnown RBP9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 CPVLQ9H3G5 476 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 RIOX1Q9H6W3 641 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 RBM28Q9NW13 759 aaKnown RBP9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 RBM27Q9P2N5 1060 aaKnown RBP9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 FRMPD3Q5JV73 1810 aa9.68□□□□□ -0.86
TSPAN1-205ENST00000472170 ARVCFO00192 962 aa9.67□□□□□ -0.86
TSPAN1-205ENST00000472170 EPB41L2O43491 1005 aaKnown RBP9.67□□□□□ -0.86
TSPAN1-205ENST00000472170 SUPT20HL2P0C7V6 817 aa9.67□□□□□ -0.86
TSPAN1-205ENST00000472170 MYCLP12524 364 aaPredicted RBP9.67□□□□□ -0.86
TSPAN1-205ENST00000472170 SMPD1P17405 629 aa9.67□□□□□ -0.86
TSPAN1-205ENST00000472170 MAGEA10P43363 369 aaPredicted RBP9.67□□□□□ -0.86
TSPAN1-205ENST00000472170 MDM2Q00987 491 aaPredicted RBP9.67□□□□□ -0.86
TSPAN1-205ENST00000472170 TLE2Q04725 743 aa9.67□□□□□ -0.86
TSPAN1-205ENST00000472170 TSGA10IPQ3SY00 556 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms