RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 JMJD4Q9H9V9 463 aa27.29■■□□□ 1.96
RNF220-208ENST00000471494 GNEQ9Y223 722 aaKnown RBP27.29■■□□□ 1.96
RNF220-208ENST00000471494 ELP1O95163 1332 aa27.29■■□□□ 1.96
RNF220-208ENST00000471494 LAMA3Q16787 3333 aa27.28■■□□□ 1.96
RNF220-208ENST00000471494 BAZ2BQ9UIF8 2168 aaKnown RBP27.28■■□□□ 1.96
RNF220-208ENST00000471494 KLRF2D3W0D1 207 aa27.28■■□□□ 1.96
RNF220-208ENST00000471494 CLTBP09497 229 aa27.28■■□□□ 1.96
RNF220-208ENST00000471494 SMPD1P17405 629 aa27.28■■□□□ 1.96
RNF220-208ENST00000471494 WTAPQ15007 396 aa27.28■■□□□ 1.96
RNF220-208ENST00000471494 BMP2KLQ5H9B9 411 aa27.28■■□□□ 1.96
RNF220-208ENST00000471494 RGS22Q8NE09 1264 aa27.28■■□□□ 1.96
RNF220-208ENST00000471494 DNERQ8NFT8 737 aa27.28■■□□□ 1.96
RNF220-208ENST00000471494 VTI1AQ96AJ9 217 aa27.28■■□□□ 1.96
RNF220-208ENST00000471494 B4DLN1 442 aa27.27■■□□□ 1.96
RNF220-208ENST00000471494 SOX1O00570 391 aaPredicted RBP27.27■■□□□ 1.96
RNF220-208ENST00000471494 CTAGE5O15320 804 aa27.27■■□□□ 1.96
RNF220-208ENST00000471494 MRPL12P52815 198 aaKnown RBP27.27■■□□□ 1.96
RNF220-208ENST00000471494 NKX3-2P78367 333 aa27.27■■□□□ 1.96
RNF220-208ENST00000471494 BEX3Q00994 111 aa27.27■■□□□ 1.96
RNF220-208ENST00000471494 PDE4DQ08499 809 aa27.27■■□□□ 1.96
RNF220-208ENST00000471494 CHST3Q7LGC8 479 aa27.27■■□□□ 1.96
RNF220-208ENST00000471494 SH3RF1Q7Z6J0 888 aa27.27■■□□□ 1.96
RNF220-208ENST00000471494 DCDC2CA8MYV0 355 aa27.26■■□□□ 1.95
RNF220-208ENST00000471494 FSCN1Q16658 493 aaKnown RBP27.26■■□□□ 1.95
RNF220-208ENST00000471494 TMEM67Q5HYA8 995 aa27.26■■□□□ 1.95
RNF220-208ENST00000471494 ANKRD33Q7Z3H0 272 aa27.26■■□□□ 1.95
RNF220-208ENST00000471494 SKAP1Q86WV1 359 aa27.26■■□□□ 1.95
RNF220-208ENST00000471494 MCF2L2Q86YR7 1114 aa27.26■■□□□ 1.95
RNF220-208ENST00000471494 LRCH3Q96II8 777 aa27.26■■□□□ 1.95
RNF220-208ENST00000471494 MAF1Q9H063 256 aa27.26■■□□□ 1.95
RNF220-208ENST00000471494 LSG1Q9H089 658 aaKnown RBP27.26■■□□□ 1.95
RNF220-208ENST00000471494 MAD2L2Q9UI95 211 aa27.26■■□□□ 1.95
RNF220-208ENST00000471494 MRPL11Q9Y3B7 192 aaKnown RBP27.26■■□□□ 1.95
RNF220-208ENST00000471494 SZT2Q5T011 3432 aa27.25■■□□□ 1.95
RNF220-208ENST00000471494 MROH7Q68CQ1 1323 aa27.25■■□□□ 1.95
RNF220-208ENST00000471494 A0A0U1RQG5 324 aaPredicted RBP27.25■■□□□ 1.95
RNF220-208ENST00000471494 TRIM43BA6NCK2 446 aa27.25■■□□□ 1.95
RNF220-208ENST00000471494 PALM3A6NDB9 673 aaPredicted RBP27.25■■□□□ 1.95
RNF220-208ENST00000471494 DYNC1LI2O43237 492 aaPredicted RBP27.25■■□□□ 1.95
RNF220-208ENST00000471494 GRM4Q14833 912 aa27.25■■□□□ 1.95
RNF220-208ENST00000471494 LRIT3Q3SXY7 679 aa27.25■■□□□ 1.95
RNF220-208ENST00000471494 MB21D2Q8IYB1 491 aaPredicted RBP27.25■■□□□ 1.95
RNF220-208ENST00000471494 BADQ92934 168 aa27.25■■□□□ 1.95
RNF220-208ENST00000471494 TRIM43Q96BQ3 446 aaPredicted RBP27.25■■□□□ 1.95
RNF220-208ENST00000471494 TOX2Q96NM4 488 aa27.25■■□□□ 1.95
RNF220-208ENST00000471494 Q9Y3F1 56 aa27.25■■□□□ 1.95
RNF220-208ENST00000471494 ZEB2O60315 1214 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 PTGS1P23219 599 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 EDNRBP24530 442 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 DUSP28Q4G0W2 176 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 AMNQ9BXJ7 453 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 WDR11Q9BZH6 1224 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 SENP2Q9HC62 589 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 ANO2Q9NQ90 1003 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 TMEM39AQ9NV64 488 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 KIAA1217Q5T5P2 1943 aa27.24■■□□□ 1.95
RNF220-208ENST00000471494 ANTXR2P58335 489 aa27.23■■□□□ 1.95
RNF220-208ENST00000471494 CATIPQ7Z7H3 387 aa27.23■■□□□ 1.95
RNF220-208ENST00000471494 ZBTB5O15062 677 aa27.22■■□□□ 1.95
RNF220-208ENST00000471494 KIAA0355O15063 1070 aa27.22■■□□□ 1.95
RNF220-208ENST00000471494 CABYRO75952 493 aa27.22■■□□□ 1.95
RNF220-208ENST00000471494 RAG1P15918 1043 aa27.22■■□□□ 1.95
RNF220-208ENST00000471494 TMEM63BQ5T3F8 832 aa27.22■■□□□ 1.95
RNF220-208ENST00000471494 CXCL17Q6UXB2 119 aa27.22■■□□□ 1.95
RNF220-208ENST00000471494 TBC1D5Q92609 795 aa27.22■■□□□ 1.95
RNF220-208ENST00000471494 RBM47A0AV96 593 aaKnown RBP27.21■■□□□ 1.95
RNF220-208ENST00000471494 ARVCFO00192 962 aa27.21■■□□□ 1.95
RNF220-208ENST00000471494 FAAP100Q0VG06 881 aa27.21■■□□□ 1.95
RNF220-208ENST00000471494 TROAPQ12815 778 aa27.21■■□□□ 1.95
RNF220-208ENST00000471494 PPP2R5BQ15173 497 aa27.21■■□□□ 1.95
RNF220-208ENST00000471494 CASC1Q6TDU7 716 aa27.21■■□□□ 1.95
RNF220-208ENST00000471494 HOMER1Q86YM7 354 aa27.21■■□□□ 1.95
RNF220-208ENST00000471494 SYTL5Q8TDW5 730 aaPredicted RBP27.21■■□□□ 1.95
RNF220-208ENST00000471494 IGDCC4Q8TDY8 1250 aa27.21■■□□□ 1.95
RNF220-208ENST00000471494 SCFD2Q8WU76 684 aa27.21■■□□□ 1.95
RNF220-208ENST00000471494 MTMR8Q96EF0 704 aa27.21■■□□□ 1.95
RNF220-208ENST00000471494 SLC27A2O14975 620 aa27.2■■□□□ 1.94
RNF220-208ENST00000471494 CDK7P50613 346 aa27.2■■□□□ 1.94
RNF220-208ENST00000471494 NSUN6Q8TEA1 469 aaKnown RBP27.2■■□□□ 1.94
RNF220-208ENST00000471494 CCDC136Q96JN2 1154 aa27.2■■□□□ 1.94
RNF220-208ENST00000471494 PRC1O43663 620 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 CFBP00751 764 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 MCM5P33992 734 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 TRAF1Q13077 416 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 CREB3L3Q68CJ9 461 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 TAAR1Q96RJ0 339 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 RMDN3Q96TC7 470 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 MTA3Q9BTC8 594 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 COL20A1Q9P218 1284 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 PCDHA1Q9Y5I3 950 aa27.19■■□□□ 1.94
RNF220-208ENST00000471494 NKRFO15226 690 aaKnown RBP eCLIP27.18■■□□□ 1.94
RNF220-208ENST00000471494 TLR3O15455 904 aaKnown RBP27.18■■□□□ 1.94
RNF220-208ENST00000471494 PPP1R11O60927 126 aaPredicted RBP27.18■■□□□ 1.94
RNF220-208ENST00000471494 OR6J1Q8NGC5 347 aa27.18■■□□□ 1.94
RNF220-208ENST00000471494 RIOX1Q9H6W3 641 aa27.18■■□□□ 1.94
RNF220-208ENST00000471494 LY9Q9HBG7 655 aa27.18■■□□□ 1.94
RNF220-208ENST00000471494 ITGB8P26012 769 aa27.17■■□□□ 1.94
RNF220-208ENST00000471494 CPT1AP50416 773 aa27.17■■□□□ 1.94
RNF220-208ENST00000471494 NECTIN1Q15223 517 aa27.17■■□□□ 1.94
RNF220-208ENST00000471494 FAM126BQ8IXS8 530 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms