RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 FBXO16Q8IX29 292 aaPredicted RBP17.35■□□□□ 0.37
HOXB3-206ENST00000471459 TOX2Q96NM4 488 aa17.35■□□□□ 0.37
HOXB3-206ENST00000471459 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
HOXB3-206ENST00000471459 JMJD4Q9H9V9 463 aa17.35■□□□□ 0.37
HOXB3-206ENST00000471459 ANO2Q9NQ90 1003 aa17.35■□□□□ 0.37
HOXB3-206ENST00000471459 PCDH10Q9P2E7 1040 aa17.35■□□□□ 0.37
HOXB3-206ENST00000471459 MROH7Q68CQ1 1323 aa17.35■□□□□ 0.37
HOXB3-206ENST00000471459 A0A0U1RQG5 324 aaPredicted RBP17.34■□□□□ 0.37
HOXB3-206ENST00000471459 CLTBP09497 229 aa17.34■□□□□ 0.37
HOXB3-206ENST00000471459 FSCN1Q16658 493 aaKnown RBP17.34■□□□□ 0.37
HOXB3-206ENST00000471459 CCSAPQ6IQ19 270 aaPredicted RBP17.34■□□□□ 0.37
HOXB3-206ENST00000471459 TAPT1Q6NXT6 567 aa17.34■□□□□ 0.37
HOXB3-206ENST00000471459 NSUN6Q8TEA1 469 aaKnown RBP17.34■□□□□ 0.37
HOXB3-206ENST00000471459 MTA3Q9BTC8 594 aa17.34■□□□□ 0.37
HOXB3-206ENST00000471459 WDR11Q9BZH6 1224 aa17.34■□□□□ 0.37
HOXB3-206ENST00000471459 TRIOBPQ9H2D6 2365 aa17.34■□□□□ 0.37
HOXB3-206ENST00000471459 PDGFCQ9NRA1 345 aa17.34■□□□□ 0.37
HOXB3-206ENST00000471459 TMEM39AQ9NV64 488 aa17.34■□□□□ 0.37
HOXB3-206ENST00000471459 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.33■□□□□ 0.36
HOXB3-206ENST00000471459 PALM3A6NDB9 673 aaPredicted RBP17.33■□□□□ 0.36
HOXB3-206ENST00000471459 ZBTB5O15062 677 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 TLR3O15455 904 aaKnown RBP17.33■□□□□ 0.36
HOXB3-206ENST00000471459 RAG1P15918 1043 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 SMPD1P17405 629 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 KIF5BP33176 963 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 MCM5P33992 734 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 NKX3-2P78367 333 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 DUSP28Q4G0W2 176 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 NFXL1Q6ZNB6 911 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 ANKRD33Q7Z3H0 272 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 STAG2Q8N3U4 1231 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 SEZ6LQ9BYH1 1024 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 GPHNQ9NQX3 736 aaPredicted RBP17.33■□□□□ 0.36
HOXB3-206ENST00000471459 MAD2L2Q9UI95 211 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 GNEQ9Y223 722 aaKnown RBP17.33■□□□□ 0.36
HOXB3-206ENST00000471459 SMCHD1A6NHR9 2005 aa17.33■□□□□ 0.36
HOXB3-206ENST00000471459 ASTN1O14525 1302 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 MYADML2A6NDP7 307 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 NKRFO15226 690 aaKnown RBP eCLIP17.32■□□□□ 0.36
HOXB3-206ENST00000471459 ADCY6O43306 1168 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 BEX3Q00994 111 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 GRM4Q14833 912 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 SAMD3Q8N6K7 520 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 CTCFLQ8NI51 663 aaPredicted RBP17.32■□□□□ 0.36
HOXB3-206ENST00000471459 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 IWS1Q96ST2 819 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 LSG1Q9H089 658 aaKnown RBP17.32■□□□□ 0.36
HOXB3-206ENST00000471459 PDLIM7Q9NR12 457 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 MAP3K20Q9NYL2 800 aaKnown RBP17.32■□□□□ 0.36
HOXB3-206ENST00000471459 PCDHA1Q9Y5I3 950 aa17.32■□□□□ 0.36
HOXB3-206ENST00000471459 CCDC69A6NI79 296 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 ARVCFO00192 962 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 PRC1O43663 620 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 CFBP00751 764 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 CPT1AP50416 773 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 PPP2R5BQ15173 497 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 STXBP2Q15833 593 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 LRIT3Q3SXY7 679 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 ARHGEF16Q5VV41 709 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 STOX1Q6ZVD7 989 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 HOMER1Q86YM7 354 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 IGDCC4Q8TDY8 1250 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 BADQ92934 168 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 TMEM87BQ96K49 555 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 RMDN3Q96TC7 470 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
HOXB3-206ENST00000471459 LAMA4Q16363 1823 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 FRMPD3Q5JV73 1810 aa17.31■□□□□ 0.36
HOXB3-206ENST00000471459 SLC27A2O14975 620 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 CDC45O75419 566 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 TXNP10599 105 aaKnown RBP17.3■□□□□ 0.36
HOXB3-206ENST00000471459 GNAQP50148 359 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 TROAPQ12815 778 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 TTLL4Q14679 1199 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 CREB3L3Q68CJ9 461 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 CXCL17Q6UXB2 119 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 SYNE3Q6ZMZ3 975 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 MB21D2Q8IYB1 491 aaPredicted RBP17.3■□□□□ 0.36
HOXB3-206ENST00000471459 SYTL5Q8TDW5 730 aaPredicted RBP17.3■□□□□ 0.36
HOXB3-206ENST00000471459 MAP3K14Q99558 947 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 LZTS2Q9BRK4 669 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 POLR3EQ9NVU0 708 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 TAF6LQ9Y6J9 622 aa17.3■□□□□ 0.36
HOXB3-206ENST00000471459 ALPK3Q96L96 1907 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 PNMA6FA0A0J9YX94 578 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 RBM47A0AV96 593 aaKnown RBP17.29■□□□□ 0.36
HOXB3-206ENST00000471459 TRIM43BA6NCK2 446 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 KIAA0355O15063 1070 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 KPNA6O60684 536 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 DDAH1O94760 285 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 CALM1P0DP23 149 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 CALM2P0DP24 149 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 CALM3P0DP25 149 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 EDNRBP24530 442 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 IRX5P78411 483 aaPredicted RBP17.29■□□□□ 0.36
HOXB3-206ENST00000471459 FAAP100Q0VG06 881 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 NECTIN1Q15223 517 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 GPR153Q6NV75 609 aa17.29■□□□□ 0.36
HOXB3-206ENST00000471459 SH3RF1Q7Z6J0 888 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms