RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 MAP3K20Q9NYL2 800 aaKnown RBP11.21□□□□□ -0.61
POLR1A-206ENST00000471427 MCM3APO60318 1980 aa11.21□□□□□ -0.62
POLR1A-206ENST00000471427 ABCB11O95342 1321 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 A0A0U1RQG5 324 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-206ENST00000471427 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-206ENST00000471427 E7EWF7 191 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 ARVCFO00192 962 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 DYNC1LI2O43237 492 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-206ENST00000471427 ZEB2O60315 1214 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 GHRHRQ02643 423 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 TROAPQ12815 778 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 TRAF1Q13077 416 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 CDC37Q16543 378 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-206ENST00000471427 FSCN1Q16658 493 aaKnown RBP11.2□□□□□ -0.62
POLR1A-206ENST00000471427 KIAA1211Q6ZU35 1233 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 SH3RF1Q7Z6J0 888 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 IGDCC4Q8TDY8 1250 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 IWS1Q96ST2 819 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 MAP3K14Q99558 947 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 WDR11Q9BZH6 1224 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 AP5M1Q9H0R1 490 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 CPVLQ9H3G5 476 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 PDGFCQ9NRA1 345 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 MAD2L2Q9UI95 211 aa11.2□□□□□ -0.62
POLR1A-206ENST00000471427 MRPL11Q9Y3B7 192 aaKnown RBP11.2□□□□□ -0.62
POLR1A-206ENST00000471427 LAMA4Q16363 1823 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 ERICH2A1L162 156 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
POLR1A-206ENST00000471427 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
POLR1A-206ENST00000471427 CALML3P27482 149 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 SMARCA1P28370 1054 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 IRX5P78411 483 aaPredicted RBP11.19□□□□□ -0.62
POLR1A-206ENST00000471427 SART3Q15020 963 aaKnown RBP11.19□□□□□ -0.62
POLR1A-206ENST00000471427 QRICH1Q2TAL8 776 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 BMP2KLQ5H9B9 411 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 SLC30A10Q6XR72 485 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 NOL8Q76FK4 1167 aaKnown RBP11.19□□□□□ -0.62
POLR1A-206ENST00000471427 RALYLQ86SE5 291 aaKnown RBP11.19□□□□□ -0.62
POLR1A-206ENST00000471427 TLK2Q86UE8 772 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 FBXO11Q86XK2 927 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 FBXO16Q8IX29 292 aaPredicted RBP11.19□□□□□ -0.62
POLR1A-206ENST00000471427 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 NSUN6Q8TEA1 469 aaKnown RBP11.19□□□□□ -0.62
POLR1A-206ENST00000471427 BADQ92934 168 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 AMNQ9BXJ7 453 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 RIOX1Q9H6W3 641 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 TMEM39AQ9NV64 488 aa11.19□□□□□ -0.62
POLR1A-206ENST00000471427 LAMA2P24043 3122 aaKnown RBP11.18□□□□□ -0.62
POLR1A-206ENST00000471427 ZBTB5O15062 677 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 PQBP1O60828 265 aaKnown RBP11.18□□□□□ -0.62
POLR1A-206ENST00000471427 TIMP1P01033 207 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 CD4P01730 458 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 ITGB8P26012 769 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 PDE4DQ08499 809 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 GRM4Q14833 912 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 WTAPQ15007 396 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 NECTIN1Q15223 517 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 USH1GQ495M9 461 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 FAM109BQ6ICB4 259 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-206ENST00000471427 STOX1Q6ZVD7 989 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 EEPD1Q7L9B9 569 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 MB21D2Q8IYB1 491 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-206ENST00000471427 SYTL5Q8TDW5 730 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-206ENST00000471427 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 TBC1D5Q92609 795 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 VTI1AQ96AJ9 217 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 ESYT1Q9BSJ8 1104 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 LSG1Q9H089 658 aaKnown RBP11.18□□□□□ -0.62
POLR1A-206ENST00000471427 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 PRDM5Q9NQX1 630 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-206ENST00000471427 TBX21Q9UL17 535 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 RBM8AQ9Y5S9 174 aaKnown RBP11.18□□□□□ -0.62
POLR1A-206ENST00000471427 TAF6LQ9Y6J9 622 aa11.18□□□□□ -0.62
POLR1A-206ENST00000471427 DDX49Q9Y6V7 483 aaKnown RBP11.18□□□□□ -0.62
POLR1A-206ENST00000471427 KPNA6O60684 536 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 RAG1P15918 1043 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 HSD17B4P51659 736 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 BEX3Q00994 111 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 ITGA7Q13683 1181 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 SHHQ15465 462 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 TMEM63BQ5T3F8 832 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 CCDC62Q6P9F0 684 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 CXCL17Q6UXB2 119 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 FAM126BQ8IXS8 530 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 TAAR1Q96RJ0 339 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 POLR3EQ9NVU0 708 aa11.17□□□□□ -0.62
POLR1A-206ENST00000471427 GRIN2DO15399 1336 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 PNMA6FA0A0J9YX94 578 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 A6NJR5 290 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 TLR3O15455 904 aaKnown RBP11.16□□□□□ -0.62
POLR1A-206ENST00000471427 CYTH3O43739 400 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 DHX16O60231 1041 aaKnown RBP11.16□□□□□ -0.62
POLR1A-206ENST00000471427 EIF3JO75822 258 aaKnown RBP11.16□□□□□ -0.62
POLR1A-206ENST00000471427 LIFRP42702 1097 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 CPT1AP50416 773 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 ANTXR2P58335 489 aa11.16□□□□□ -0.62
POLR1A-206ENST00000471427 TTLL4Q14679 1199 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms