RNA–Protein interactions for RNA: ENST00000471294.1

HDLBP-234, Transcript of high density lipoprotein binding protein, human

TSL 4

Gene HDLBP, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-234	ENST00000471294	GJB4	Q9NTQ9	266 aa		13.8	□□□□□ -0.2
HDLBP-234	ENST00000471294	PCDHA6	Q9UN73	950 aa		13.8	□□□□□ -0.2
HDLBP-234	ENST00000471294	RIPK3	Q9Y572	518 aa		13.8	□□□□□ -0.2
HDLBP-234	ENST00000471294	PCDHA8	Q9Y5H6	950 aa		13.8	□□□□□ -0.2
HDLBP-234	ENST00000471294	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.8	□□□□□ -0.2
HDLBP-234	ENST00000471294	AOC2	O75106	756 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	ERCC3	P19447	782 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	GUCY1B3	Q02153	619 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	CRHR2	Q13324	411 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	PKP1	Q13835	747 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	PLS1	Q14651	629 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294		Q3C1V9	767 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	MCTP1	Q6DN14	999 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	XRRA1	Q6P2D8	792 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	MOXD1	Q6UVY6	613 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	ANKRD13C	Q8N6S4	541 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	DNER	Q8NFT8	737 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	NAP1L4	Q99733	375 aa	Known RBP	13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	FRMPD4	Q14CM0	1322 aa		13.79	□□□□□ -0.2
HDLBP-234	ENST00000471294	CCDC194	A0A1B0GVG4	234 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	SPDYE3	A6NKU9	549 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	NFIB	O00712	420 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	DTNB	O60941	627 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	USP11	P51784	963 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	RPS6	P62753	249 aa	Known RBP	13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	MAP2K1	Q02750	393 aa	Predicted RBP	13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	NONO	Q15233	471 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	MUM1L1	Q5H9M0	696 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	MYSM1	Q5VVJ2	828 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	RNF207	Q6ZRF8	634 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	OXER1	Q8TDS5	423 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	CRYGN	Q8WXF5	182 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	A1CF	Q9NQ94	594 aa	Known RBP	13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	CYP39A1	Q9NYL5	469 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	NOL7	Q9UMY1	257 aa	Known RBP	13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	ZNF236	Q9UL36	1845 aa		13.78	□□□□□ -0.2
HDLBP-234	ENST00000471294	DNAJC25-GNG10	A0A024R161	153 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294		B4DLN1	442 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	KIF28P	B7ZC32	967 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	BMP15	O95972	392 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	CFB	P00751	764 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	CYP3A4	P08684	503 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	FCER1A	P12319	257 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	SREBF1	P36956	1147 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	GRM1	Q13255	1194 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	NR5A1	Q13285	461 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	USP17L6P	Q6QN14	398 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	NCAPG2	Q86XI2	1143 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	RPTOR	Q8N122	1335 aa		13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	ZNF396	Q96N95	335 aa	Predicted RBP	13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	DIS3	Q9Y2L1	958 aa	Known RBP	13.77	□□□□□ -0.21
HDLBP-234	ENST00000471294	STAM2	O75886	525 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	GCFC2	P16383	781 aa	Known RBP	13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	CIITA	P33076	1130 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	GRB14	Q14449	540 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	KCTD2	Q14681	263 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	PPP4R3A	Q6IN85	833 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	CCAR1	Q8IX12	1150 aa	Known RBP	13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	ANKRD35	Q8N283	1001 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	FAM133A	Q8N9E0	248 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	IWS1	Q96ST2	819 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	MPHOSPH6	Q99547	160 aa	Known RBP	13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	ANO3	Q9BYT9	981 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	PORCN	Q9H237	461 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	HOMER2	Q9NSB8	354 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	POLR3E	Q9NVU0	708 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	RNF186	Q9NXI6	227 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	BIN2	Q9UBW5	565 aa	Predicted RBP	13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	ADD3	Q9UEY8	706 aa	Known RBP	13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	CFAP45	Q9UL16	551 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	IVNS1ABP	Q9Y6Y0	642 aa		13.76	□□□□□ -0.21
HDLBP-234	ENST00000471294	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	SLC15A5	A6NIM6	579 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	GNRH1	P01148	92 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	PTPRE	P23469	700 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	CYP3A7	P24462	503 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	FOSB	P53539	338 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	IRF5	Q13568	498 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	BAAT	Q14032	418 aa	Predicted RBP	13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	UBE2S	Q16763	222 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	JAKMIP3	Q5VZ66	844 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	NSMF	Q6X4W1	530 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	PIK3AP1	Q6ZUJ8	805 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	GPR142	Q7Z601	462 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	PLEKHH3	Q7Z736	793 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	NEK8	Q86SG6	692 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	FERMT3	Q86UX7	667 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	MSL3	Q8N5Y2	521 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	NSUN6	Q8TEA1	469 aa	Known RBP	13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	SOCS4	Q8WXH5	440 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	MMP19	Q99542	508 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	SLC5A4	Q9NY91	659 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	CPA4	Q9UI42	421 aa		13.75	□□□□□ -0.21
HDLBP-234	ENST00000471294	MYH15	Q9Y2K3	1946 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	POTEB2	H3BUK9	544 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	LAD1	O00515	517 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	HOXC6	P09630	235 aa		13.74	□□□□□ -0.21
HDLBP-234	ENST00000471294	KRT85	P78386	507 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms