RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 PWP2Q15269 919 aaKnown RBP16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 DUSP28Q4G0W2 176 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 BRDTQ58F21 947 aaPredicted RBP16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 RASGRP2Q7LDG7 609 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 MORC4Q8TE76 937 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 TSPYL2Q9H2G4 693 aaPredicted RBP16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 GRIN2DO15399 1336 aa16.35■□□□□ 0.21
SEMA3F-208ENST00000470737 MYL3P08590 195 aa16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 TOP1P11387 765 aaKnown RBP16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 PTGS1P23219 599 aa16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 SLC16A2P36021 539 aa16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 CCDC85BQ15834 202 aaPredicted RBP16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 PPP2R2DQ66LE6 453 aa16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 EVI5LQ96CN4 794 aa16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 PURBQ96QR8 312 aaKnown RBP16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 WDR11Q9BZH6 1224 aa16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 ALDH8A1Q9H2A2 487 aaPredicted RBP16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 HELLSQ9NRZ9 838 aa16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 RAD50Q92878 1312 aa16.34■□□□□ 0.21
SEMA3F-208ENST00000470737 B4DLN1 442 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 FOXP2O15409 715 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 PFKMP08237 780 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 CALML3P27482 149 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 MRPL12P52815 198 aaKnown RBP16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 PDE4DQ08499 809 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 ALX1Q15699 326 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 FAM47CQ5HY64 1035 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 VPS53Q5VIR6 699 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 TTBK2Q6IQ55 1244 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 OR6J1Q8NGC5 347 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 SCLYQ96I15 445 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 YTHDC1Q96MU7 727 aaKnown RBP16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 GPCPD1Q9NPB8 672 aa16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 YBX2Q9Y2T7 364 aaKnown RBP16.33■□□□□ 0.2
SEMA3F-208ENST00000470737 NFIBO00712 420 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 TNKSO95271 1327 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 ACTN1P12814 892 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 NOVP48745 357 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 MRPS5P82675 430 aaKnown RBP16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 PURAQ00577 322 aaKnown RBP16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 ADGRE1Q14246 886 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 PPP2R5BQ15173 497 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 TMEM63BQ5T3F8 832 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 ANKRD45Q5TZF3 282 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 FRMPD2Q68DX3 1309 aaPredicted RBP16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 RNF207Q6ZRF8 634 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 ASB2Q96Q27 587 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 MTG1Q9BT17 334 aaPredicted RBP16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 PCDHA11Q9Y5I1 949 aa16.32■□□□□ 0.2
SEMA3F-208ENST00000470737 FGRP09769 529 aa16.31■□□□□ 0.2
SEMA3F-208ENST00000470737 ATP2A2P16615 1042 aaKnown RBP16.31■□□□□ 0.2
SEMA3F-208ENST00000470737 RABGGTBP53611 331 aa16.31■□□□□ 0.2
SEMA3F-208ENST00000470737 MICALL1Q8N3F8 863 aa16.31■□□□□ 0.2
SEMA3F-208ENST00000470737 TCP11L1Q9NUJ3 509 aa16.31■□□□□ 0.2
SEMA3F-208ENST00000470737 TRMT13Q9NUP7 481 aaKnown RBP16.31■□□□□ 0.2
SEMA3F-208ENST00000470737 RBM47A0AV96 593 aaKnown RBP16.3■□□□□ 0.2
SEMA3F-208ENST00000470737 KPNA6O60684 536 aa16.3■□□□□ 0.2
SEMA3F-208ENST00000470737 FGAP02671 866 aa16.3■□□□□ 0.2
SEMA3F-208ENST00000470737 CYP2C9P11712 490 aa16.3■□□□□ 0.2
SEMA3F-208ENST00000470737 MCMDC2Q4G0Z9 681 aa16.3■□□□□ 0.2
SEMA3F-208ENST00000470737 SLC30A10Q6XR72 485 aa16.3■□□□□ 0.2
SEMA3F-208ENST00000470737 DEFB128Q7Z7B8 93 aa16.3■□□□□ 0.2
SEMA3F-208ENST00000470737 RETREG2Q8NC44 543 aa16.3■□□□□ 0.2
SEMA3F-208ENST00000470737 SCFD2Q8WU76 684 aa16.3■□□□□ 0.2
SEMA3F-208ENST00000470737 SCN5AQ14524 2016 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 WDR19Q8NEZ3 1342 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 SALL3Q9BXA9 1300 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 PDHBP11177 359 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 RFC2P35250 354 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 RPS6P62753 249 aaKnown RBP16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 TMEM67Q5HYA8 995 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 MFSD6Q6ZSS7 791 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 DNERQ8NFT8 737 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 ADAMTS19Q8TE59 1207 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 TTC14Q96N46 770 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 NOD1Q9Y239 953 aa16.29■□□□□ 0.2
SEMA3F-208ENST00000470737 ZMYM6O95789 1325 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 GTPBP6O43824 516 aaPredicted RBP16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 PCP11498 1178 aaKnown RBP16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 MYOGP15173 224 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 HAND2P61296 217 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 ZNF543Q08ER8 600 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 BFSP2Q13515 415 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 TTLL4Q14679 1199 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 NBPF20Q3BBV1 942 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 NFRKBQ6P4R8 1299 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 TICAM2Q86XR7 235 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 CLEC4DQ8WXI8 215 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 FAM227BQ96M60 508 aa16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 UHRF1Q96T88 793 aaPredicted RBP16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 FTOQ9C0B1 505 aaKnown RBP eCLIP16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 RNF41Q9H4P4 317 aaPredicted RBP16.28■□□□□ 0.2
SEMA3F-208ENST00000470737 TANC1Q9C0D5 1861 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms