RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 PAF1Q8N7H5 531 aa15.58■□□□□ 0.09
HDAC7-219ENST00000470668 WHAMMQ8TF30 809 aa15.58■□□□□ 0.09
HDAC7-219ENST00000470668 HAUS2Q9NVX0 235 aa15.58■□□□□ 0.09
HDAC7-219ENST00000470668 DAAM1Q9Y4D1 1078 aa15.58■□□□□ 0.09
HDAC7-219ENST00000470668 USP17L12C9JPN9 530 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 USP17L21D6R901 530 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.08
HDAC7-219ENST00000470668 PDE1CQ14123 709 aaPredicted RBP15.58■□□□□ 0.08
HDAC7-219ENST00000470668 SEPT6Q14141 434 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 PSMD6Q15008 389 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 CAPRIN2Q6IMN6 1127 aaKnown RBP15.58■□□□□ 0.08
HDAC7-219ENST00000470668 ZNF449Q6P9G9 518 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 STOX1Q6ZVD7 989 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 MYOCDQ8IZQ8 938 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 SPATA5Q8NB90 893 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 VPS37BQ9H9H4 285 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 RWDD2AQ9UIY3 292 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 ABCA6Q8N139 1617 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 HECW2Q9P2P5 1572 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 PPP2R5BQ15173 497 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 PHLDB3Q6NSJ2 640 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 P2RX5Q93086 422 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 CCT8L2Q96SF2 557 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 MLXIPLQ9NP71 852 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 TBK1Q9UHD2 729 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 L1RE1Q9UN81 338 aa15.58■□□□□ 0.08
HDAC7-219ENST00000470668 ARMC9Q7Z3E5 817 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 RPUSD2Q8IZ73 545 aaKnown RBP15.57■□□□□ 0.08
HDAC7-219ENST00000470668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.57■□□□□ 0.08
HDAC7-219ENST00000470668 GDAP1Q8TB36 358 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 IL17RAQ96F46 866 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 ZSWIM5Q9P217 1185 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 GGT7Q9UJ14 662 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 TFR2Q9UP52 801 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 SPHKAPQ2M3C7 1700 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 PCDH11XQ9BZA7 1347 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 PCDH11YQ9BZA8 1340 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 PUM3Q15397 648 aaKnown RBP15.57■□□□□ 0.08
HDAC7-219ENST00000470668 BICD1Q96G01 975 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 GPCPD1Q9NPB8 672 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 HPCAL4Q9UM19 191 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 SPDYE3A6NKU9 549 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 PGRMC1O00264 195 aaKnown RBP15.57■□□□□ 0.08
HDAC7-219ENST00000470668 THAP12O43422 761 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 COG7P83436 770 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 RETREG2Q8NC44 543 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 SPATA4Q8NEY3 305 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 AATFQ9NY61 560 aaKnown RBP eCLIP15.57■□□□□ 0.084e-7■□□□□ 10
HDAC7-219ENST00000470668 MMEP08473 750 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 IFNAR1P17181 557 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 CUL4BQ13620 913 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 CALCRLQ16602 461 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 SDCCAG8Q86SQ7 713 aaPredicted RBP15.57■□□□□ 0.08
HDAC7-219ENST00000470668 ARHGAP24Q8N264 748 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 IQCDQ96DY2 449 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 SAP30BPQ9UHR5 308 aaKnown RBP15.57■□□□□ 0.08
HDAC7-219ENST00000470668 USTQ9Y2C2 406 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 FRMD4BQ9Y2L6 1034 aa15.57■□□□□ 0.08
HDAC7-219ENST00000470668 FMNL1O95466 1100 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-219ENST00000470668 IFNB1P01574 187 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 DESP17661 470 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 IRAK4Q9NWZ3 460 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 SMARCAL1Q9NZC9 954 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 GLI2P10070 1586 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 ARHGAP42A6NI28 874 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 LRRIQ3A6PVS8 624 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-219ENST00000470668 HDLBPQ00341 1268 aaKnown RBP15.56■□□□□ 0.08
HDAC7-219ENST00000470668 NBPF9Q3BBW0 867 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 GAS8O95995 478 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 SCG2P13521 617 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 KRT5P13647 590 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 BRD2P25440 801 aaKnown RBP15.56■□□□□ 0.08
HDAC7-219ENST00000470668 MAP7Q14244 749 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 FAM133AQ8N9E0 248 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 FMO2Q99518 471 aa15.56■□□□□ 0.08
HDAC7-219ENST00000470668 DNAJC17Q9NVM6 304 aaKnown RBP15.56■□□□□ 0.08
HDAC7-219ENST00000470668 ARMCX3Q9UH62 379 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-219ENST00000470668 PACSIN2Q9UNF0 486 aaPredicted RBP15.56■□□□□ 0.08
HDAC7-219ENST00000470668 TFRCP02786 760 aaKnown RBP15.55■□□□□ 0.08
HDAC7-219ENST00000470668 TFAP4Q01664 338 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 LRRC23Q53EV4 343 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-219ENST00000470668 MAEAQ7L5Y9 396 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 PHLDB2Q86SQ0 1253 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 ENGASEQ8NFI3 743 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 RILPQ96NA2 401 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 OSBPL9Q96SU4 736 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 SYNCQ9H7C4 482 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 BIN2Q9UBW5 565 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-219ENST00000470668 AXIN2Q9Y2T1 843 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 CLASP1Q7Z460 1538 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 SH2B2O14492 632 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-219ENST00000470668 TROVE2P10155 538 aaKnown RBP eCLIP15.55■□□□□ 0.08
HDAC7-219ENST00000470668 XRCC5P13010 732 aaKnown RBP15.55■□□□□ 0.08
HDAC7-219ENST00000470668 CCNI2Q6ZMN8 369 aaPredicted RBP15.55■□□□□ 0.08
HDAC7-219ENST00000470668 INTUQ9ULD6 942 aa15.55■□□□□ 0.08
HDAC7-219ENST00000470668 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.55■□□□□ 0.08
HDAC7-219ENST00000470668 ZNF473Q8WTR7 871 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms