RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CYB5R4Q7L1T6 521 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 DGKHQ86XP1 1220 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 APOBEC3FQ8IUX4 373 aaKnown RBP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 IGDCC4Q8TDY8 1250 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 TCEANC2Q96MN5 208 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 ZSCAN10Q96SZ4 725 aaPredicted RBP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 LLPHQ9BRT6 129 aaKnown RBP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 ARHGEF10LQ9HCE6 1279 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 DDX4Q9NQI0 724 aaKnown RBP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 RAB6BQ9NRW1 208 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 NXF1Q9UBU9 619 aaKnown RBP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 TPCN1Q9ULQ1 816 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 SMC3Q9UQE7 1217 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 SLC12A7Q9Y666 1083 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 GREB1LQ9C091 1923 aaPredicted RBP7.73□□□□□ -1.17
VAMP3-202ENST00000470357 SIPA1L1O43166 1804 aa7.73□□□□□ -1.17
VAMP3-202ENST00000470357 A0A0C4DFX4 3053 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 KLF18A0A0U1RQI7 1052 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 ZBTB43O43298 467 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 DDAH1O94760 285 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 STAU1O95793 577 aaKnown RBP7.72□□□□□ -1.17
VAMP3-202ENST00000470357 GNRH1P01148 92 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 RASA1P20936 1047 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 NUCB2P80303 420 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 HMGN5P82970 282 aaKnown RBP7.72□□□□□ -1.17
VAMP3-202ENST00000470357 TFAP4Q01664 338 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 APOBRQ0VD83 1088 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 TCP10Q12799 353 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 NFIAQ12857 509 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 ME3Q16798 604 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 IFIT1BQ5T764 474 aaKnown RBP7.72□□□□□ -1.17
VAMP3-202ENST00000470357 FOXD4L5Q5VV16 416 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-202ENST00000470357 CHST3Q7LGC8 479 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 CATIPQ7Z7H3 387 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 METTL16Q86W50 562 aaKnown RBP7.72□□□□□ -1.17
VAMP3-202ENST00000470357 NEDD1Q8NHV4 660 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 RNF217Q8TC41 542 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 ANKS1AQ92625 1134 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 GLMNQ92990 594 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 GTF3C6Q969F1 213 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 LY9Q9HBG7 655 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 VEZTQ9HBM0 779 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 CHMP5Q9NZZ3 219 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 NAP1L2Q9ULW6 460 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-202ENST00000470357 SCAF8Q9UPN6 1271 aaKnown RBP7.72□□□□□ -1.17
VAMP3-202ENST00000470357 PPP2R3BQ9Y5P8 575 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 TNKSO95271 1327 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 PITPNM2Q9BZ72 1349 aa7.72□□□□□ -1.17
VAMP3-202ENST00000470357 NID2Q14112 1375 aa7.71□□□□□ -1.17
VAMP3-202ENST00000470357 PAPPA2Q9BXP8 1791 aa7.71□□□□□ -1.17
VAMP3-202ENST00000470357 KIAA0100Q14667 2235 aaKnown RBP7.71□□□□□ -1.17
VAMP3-202ENST00000470357 CEP290O15078 2479 aa7.71□□□□□ -1.17
VAMP3-202ENST00000470357 CLRN2A0PK11 232 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 GOLGA8BA8MQT2 603 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 TCP10L2B9ZVM9 353 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 CPLX1O14810 134 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 PRDM1O75626 825 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 PDIA3P30101 505 aaKnown RBP7.71□□□□□ -1.18
VAMP3-202ENST00000470357 METAP2P50579 478 aaKnown RBP eCLIP7.71□□□□□ -1.18
VAMP3-202ENST00000470357 RNF144AP50876 292 aaPredicted RBP7.71□□□□□ -1.18
VAMP3-202ENST00000470357 SEC23AQ15436 765 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 NBPF9Q3BBW0 867 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 PRAMEF18Q5VWM3 479 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 APOA5Q6Q788 366 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 TREML4Q6UXN2 200 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 PRICKLE2Q7Z3G6 844 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 CCDC83Q8IWF9 413 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 STK11IPQ8N1F8 1099 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 DEPDC4Q8N2C3 294 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 ENAHQ8N8S7 591 aaPredicted RBP7.71□□□□□ -1.18
VAMP3-202ENST00000470357 RGS22Q8NE09 1264 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 DYNLL2Q96FJ2 89 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 UCN2Q96RP3 112 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 MAP3K14Q99558 947 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 LRRC2Q9BYS8 371 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 KAT14Q9H8E8 782 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 GINM1Q9NU53 330 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 RBM28Q9NW13 759 aaKnown RBP7.71□□□□□ -1.18
VAMP3-202ENST00000470357 ATAD5Q96QE3 1844 aa7.71□□□□□ -1.18
VAMP3-202ENST00000470357 DDTLA6NHG4 134 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-202ENST00000470357 FKTNO75072 461 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 TOP1P11387 765 aaKnown RBP7.7□□□□□ -1.18
VAMP3-202ENST00000470357 KIF5BP33176 963 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 GNAQP50148 359 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 CACNB3P54284 484 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 CAP1Q01518 475 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 NFX1Q12986 1120 aaKnown RBP7.7□□□□□ -1.18
VAMP3-202ENST00000470357 CLN3Q13286 438 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 SLC4A8Q2Y0W8 1093 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 CERKLQ49MI3 558 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-202ENST00000470357 DCAF15Q66K64 600 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 TATDN1Q6P1N9 297 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 TMEM179Q6ZVK1 233 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 ZNF654Q8IZM8 581 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 FAM184AQ8NB25 1140 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 CTCFLQ8NI51 663 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-202ENST00000470357 WASF1Q92558 559 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 CALR3Q96L12 384 aaKnown RBP7.7□□□□□ -1.18
VAMP3-202ENST00000470357 ZMYND15Q9H091 742 aa7.7□□□□□ -1.18
VAMP3-202ENST00000470357 KANSL2Q9H9L4 492 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms