RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 ACAD9Q9H845 621 aa15.85■□□□□ 0.13
LINC00173-201ENST00000470091 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC00173-201ENST00000470091 SOWAHBA6NEL2 793 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 MOXD2PA6NHM9 499 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 B4E1Z4 1266 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 ASGR1P07306 291 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 ANTXR2P58335 489 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 EXOSC10Q01780 885 aaKnown RBP15.84■□□□□ 0.13
LINC00173-201ENST00000470091 FPGSQ05932 587 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 TRDNQ13061 729 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 RRP12Q5JTH9 1297 aaKnown RBP15.84■□□□□ 0.13
LINC00173-201ENST00000470091 AKNAD1Q5T1N1 836 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 CHST3Q7LGC8 479 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 ANKRD33Q7Z3H0 272 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 PCSK9Q8NBP7 692 aaKnown RBP15.84■□□□□ 0.13
LINC00173-201ENST00000470091 TOX2Q96NM4 488 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 CDX2Q99626 313 aaPredicted RBP15.84■□□□□ 0.13
LINC00173-201ENST00000470091 A1CFQ9NQ94 594 aaKnown RBP15.84■□□□□ 0.13
LINC00173-201ENST00000470091 ANAPC4Q9UJX5 808 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 PRR12Q9ULL5 1215 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 LIMCH1Q9UPQ0 1083 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 ZNF536O15090 1300 aa15.84■□□□□ 0.13
LINC00173-201ENST00000470091 LTBP2Q14767 1821 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 PRC1O43663 620 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 GJA9P57773 515 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 BEX3Q00994 111 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 CUL4AQ13619 759 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 ANKRD1Q15327 319 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 CCDC96Q2M329 555 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 MUM1L1Q5H9M0 696 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 CYB5R4Q7L1T6 521 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.83■□□□□ 0.12
LINC00173-201ENST00000470091 FAM133AQ8N9E0 248 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 TPCN1Q9ULQ1 816 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 PLIN4Q96Q06 1357 aa15.83■□□□□ 0.12
LINC00173-201ENST00000470091 MCM3APO60318 1980 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.82■□□□□ 0.12
LINC00173-201ENST00000470091 TIMP1P01033 207 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 PTGS1P23219 599 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 MCM5P33992 734 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 SLC16A2P36021 539 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 SMAD3P84022 425 aaKnown RBP15.82■□□□□ 0.12
LINC00173-201ENST00000470091 FGD1P98174 961 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 TNFAIP2Q03169 654 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 PPP4R3BQ5MIZ7 849 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 TTBK2Q6IQ55 1244 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 NSMFQ6X4W1 530 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 MFSD6Q6ZSS7 791 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 EEPD1Q7L9B9 569 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 BRF1Q92994 677 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 PURBQ96QR8 312 aaKnown RBP15.82■□□□□ 0.12
LINC00173-201ENST00000470091 KATNBL1Q9H079 304 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 TTYH1Q9H313 450 aaPredicted RBP15.82■□□□□ 0.12
LINC00173-201ENST00000470091 RNF41Q9H4P4 317 aaPredicted RBP15.82■□□□□ 0.12
LINC00173-201ENST00000470091 CNNM2Q9H8M5 875 aa15.82■□□□□ 0.12
LINC00173-201ENST00000470091 GPHNQ9NQX3 736 aaPredicted RBP15.82■□□□□ 0.12
LINC00173-201ENST00000470091 ASB14A6NK59 587 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 ARVCFO00192 962 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 DYNC1LI2O43237 492 aaPredicted RBP15.81■□□□□ 0.12
LINC00173-201ENST00000470091 ELP1O95163 1332 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 CDK7P50613 346 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 ME3Q16798 604 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 TKFCQ3LXA3 575 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 WDR19Q8NEZ3 1342 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 MYLIPQ8WY64 445 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 ZSCAN31Q96LW9 406 aaPredicted RBP15.81■□□□□ 0.12
LINC00173-201ENST00000470091 KRT23Q9C075 422 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 UPF3AQ9H1J1 476 aaKnown RBP15.81■□□□□ 0.12
LINC00173-201ENST00000470091 GPCPD1Q9NPB8 672 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 CCPG1Q9ULG6 757 aa15.81■□□□□ 0.12
LINC00173-201ENST00000470091 CDH23Q9H251 3354 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 A0A0U1RQG5 324 aaPredicted RBP15.8■□□□□ 0.12
LINC00173-201ENST00000470091 CTAGE5O15320 804 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 ORC4O43929 436 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 PLA2G6O60733 806 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 KDM4AO75164 1064 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 CST5P28325 142 aaPredicted RBP15.8■□□□□ 0.12
LINC00173-201ENST00000470091 APOBRQ0VD83 1088 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 ST3GAL1Q11201 340 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 TMEM63BQ5T3F8 832 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 CXCL17Q6UXB2 119 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC00173-201ENST00000470091 AGXT2Q9BYV1 514 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 AP5M1Q9H0R1 490 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 SH2B1Q9NRF2 756 aaPredicted RBP15.8■□□□□ 0.12
LINC00173-201ENST00000470091 TBX21Q9UL17 535 aa15.8■□□□□ 0.12
LINC00173-201ENST00000470091 VCANP13611 3396 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 ASTN1O14525 1302 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 FRMPD2Q68DX3 1309 aaPredicted RBP15.79■□□□□ 0.12
LINC00173-201ENST00000470091 SH2B2O14492 632 aaPredicted RBP15.79■□□□□ 0.12
LINC00173-201ENST00000470091 ACRP10323 421 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 SMPD1P17405 629 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 DDIT3P35638 169 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 BAATQ14032 418 aaPredicted RBP15.79■□□□□ 0.12
LINC00173-201ENST00000470091 MFSD5Q6N075 450 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
LINC00173-201ENST00000470091 FBXO16Q8IX29 292 aaPredicted RBP15.79■□□□□ 0.12
LINC00173-201ENST00000470091 NECAB1Q8N987 351 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms