RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 TROAPQ12815 778 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 WTAPQ15007 396 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 SART3Q15020 963 aaKnown RBP16.4■□□□□ 0.22
COMMD3-208ENST00000470045 SLC35G1Q2M3R5 365 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 USH1GQ495M9 461 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 TRIM60Q495X7 471 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 DNERQ8NFT8 737 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 IGDCC4Q8TDY8 1250 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
COMMD3-208ENST00000470045 GNEQ9Y223 722 aaKnown RBP16.4■□□□□ 0.22
COMMD3-208ENST00000470045 IRX5P78411 483 aaPredicted RBP16.39■□□□□ 0.21
COMMD3-208ENST00000470045 TNFAIP2Q03169 654 aa16.39■□□□□ 0.21
COMMD3-208ENST00000470045 KCNA10Q16322 511 aa16.39■□□□□ 0.21
COMMD3-208ENST00000470045 CREB3L3Q68CJ9 461 aa16.39■□□□□ 0.21
COMMD3-208ENST00000470045 CHST3Q7LGC8 479 aa16.39■□□□□ 0.21
COMMD3-208ENST00000470045 FBXO16Q8IX29 292 aaPredicted RBP16.39■□□□□ 0.21
COMMD3-208ENST00000470045 ANO2Q9NQ90 1003 aa16.39■□□□□ 0.21
COMMD3-208ENST00000470045 ATP11BQ9Y2G3 1177 aa16.39■□□□□ 0.21
COMMD3-208ENST00000470045 KIAA1217Q5T5P2 1943 aa16.39■□□□□ 0.21
COMMD3-208ENST00000470045 CDC45O75419 566 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 C6orf222P0C671 652 aaPredicted RBP16.38■□□□□ 0.21
COMMD3-208ENST00000470045 SMPD1P17405 629 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 CALML3P27482 149 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 GHRHRQ02643 423 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 COL9A3Q14050 684 aaPredicted RBP16.38■□□□□ 0.21
COMMD3-208ENST00000470045 TMEM67Q5HYA8 995 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 IQSEC1Q6DN90 963 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 PCSK9Q8NBP7 692 aaKnown RBP16.38■□□□□ 0.21
COMMD3-208ENST00000470045 RIOX1Q9H6W3 641 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 LY9Q9HBG7 655 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 SPC25Q9HBM1 224 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 PDGFCQ9NRA1 345 aa16.38■□□□□ 0.21
COMMD3-208ENST00000470045 BAZ2BQ9UIF8 2168 aaKnown RBP16.38■□□□□ 0.21
COMMD3-208ENST00000470045 RBM47A0AV96 593 aaKnown RBP16.37■□□□□ 0.21
COMMD3-208ENST00000470045 OPLAHO14841 1288 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 ZBTB5O15062 677 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
COMMD3-208ENST00000470045 PPP1R11O60927 126 aaPredicted RBP16.37■□□□□ 0.21
COMMD3-208ENST00000470045 EEPD1Q7L9B9 569 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 TLK2Q86UE8 772 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 NUP133Q8WUM0 1156 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 MAP3K14Q99558 947 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 AMNQ9BXJ7 453 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 VAT1LQ9HCJ6 419 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 PDLIM7Q9NR12 457 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 PCDH10Q9P2E7 1040 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 MRPL11Q9Y3B7 192 aaKnown RBP16.37■□□□□ 0.21
COMMD3-208ENST00000470045 Q9Y3F1 56 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 ELP1O95163 1332 aa16.37■□□□□ 0.21
COMMD3-208ENST00000470045 SH2B2O14492 632 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-208ENST00000470045 PRC1O43663 620 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 CYTH3O43739 400 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 DDAH1O94760 285 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 ASGR1P07306 291 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 MCM5P33992 734 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 TLE2Q04725 743 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 DUSP28Q4G0W2 176 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 GNASQ5JWF2 1037 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 TMEM63BQ5T3F8 832 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 ANKRD33Q7Z3H0 272 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 MCF2L2Q86YR7 1114 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 SYTL5Q8TDW5 730 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-208ENST00000470045 TBC1D5Q92609 795 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 TMEM87BQ96K49 555 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
COMMD3-208ENST00000470045 STARD7Q9NQZ5 370 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 COL20A1Q9P218 1284 aa16.36■□□□□ 0.21
COMMD3-208ENST00000470045 PTGS1P23219 599 aa16.35■□□□□ 0.21
COMMD3-208ENST00000470045 HSD17B4P51659 736 aa16.35■□□□□ 0.21
COMMD3-208ENST00000470045 CASC1Q6TDU7 716 aa16.35■□□□□ 0.21
COMMD3-208ENST00000470045 CATIPQ7Z7H3 387 aa16.35■□□□□ 0.21
COMMD3-208ENST00000470045 ZNF654Q8IZM8 581 aa16.35■□□□□ 0.21
COMMD3-208ENST00000470045 GLT1D1Q96MS3 346 aa16.35■□□□□ 0.21
COMMD3-208ENST00000470045 TOX2Q96NM4 488 aa16.35■□□□□ 0.21
COMMD3-208ENST00000470045 MPHOSPH6Q99547 160 aaKnown RBP16.35■□□□□ 0.21
COMMD3-208ENST00000470045 LIFRP42702 1097 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 CDK7P50613 346 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 MDM2Q00987 491 aaPredicted RBP16.34■□□□□ 0.21
COMMD3-208ENST00000470045 BEX3Q00994 111 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 PDE4DQ08499 809 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 FSCN1Q16658 493 aaKnown RBP16.34■□□□□ 0.21
COMMD3-208ENST00000470045 TSGA10IPQ3SY00 556 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 SH3RF1Q7Z6J0 888 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 TDHQ8IZJ6 230 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 TMTC2Q8N394 836 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 TAAR1Q96RJ0 339 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 PIGSQ96S52 555 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 UBE2OQ9C0C9 1292 aaKnown RBP16.34■□□□□ 0.21
COMMD3-208ENST00000470045 MAP3K20Q9NYL2 800 aaKnown RBP16.34■□□□□ 0.21
COMMD3-208ENST00000470045 PRKAG2Q9UGJ0 569 aa16.34■□□□□ 0.21
COMMD3-208ENST00000470045 TRIM43BA6NCK2 446 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 B4DLN1 442 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 DYNC1LI2O43237 492 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-208ENST00000470045 CLTBP09497 229 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 MRPL12P52815 198 aaKnown RBP16.33■□□□□ 0.2
COMMD3-208ENST00000470045 TRAF1Q13077 416 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 RNF20Q5VTR2 975 aa16.33■□□□□ 0.2
COMMD3-208ENST00000470045 NOL8Q76FK4 1167 aaKnown RBP16.33■□□□□ 0.2
COMMD3-208ENST00000470045 SAMD3Q8N6K7 520 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms