RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CYP46A1Q9Y6A2 500 aa20.42■□□□□ 0.86
MRPL28-208ENST00000469744 PTPDC1A2A3K4 754 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 MYADML2A6NDP7 307 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 SLC27A2O14975 620 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 TRDNQ13061 729 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 SEC23AQ15436 765 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 SLC30A10Q6XR72 485 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 STOX1Q6ZVD7 989 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 CLEC4DQ8WXI8 215 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 GDF15Q99988 308 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 PHF24Q9UPV7 400 aa20.41■□□□□ 0.86
MRPL28-208ENST00000469744 SZT2Q5T011 3432 aa20.4■□□□□ 0.86
MRPL28-208ENST00000469744 PTGS1P23219 599 aa20.4■□□□□ 0.86
MRPL28-208ENST00000469744 KRT32Q14532 448 aa20.4■□□□□ 0.86
MRPL28-208ENST00000469744 TRIM60Q495X7 471 aa20.4■□□□□ 0.86
MRPL28-208ENST00000469744 RUFY3Q7L099 469 aa20.4■□□□□ 0.86
MRPL28-208ENST00000469744 EEPD1Q7L9B9 569 aa20.4■□□□□ 0.86
MRPL28-208ENST00000469744 JAKMIP1Q96N16 626 aaKnown RBP20.4■□□□□ 0.86
MRPL28-208ENST00000469744 SH2B1Q9NRF2 756 aaPredicted RBP20.4■□□□□ 0.86
MRPL28-208ENST00000469744 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.39■□□□□ 0.85
MRPL28-208ENST00000469744 ASB14A6NK59 587 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 E7EWF7 191 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 DUSP11O75319 330 aaKnown RBP20.39■□□□□ 0.85
MRPL28-208ENST00000469744 PARP1P09874 1014 aaKnown RBP20.39■□□□□ 0.85
MRPL28-208ENST00000469744 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
MRPL28-208ENST00000469744 CALML3P27482 149 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 AK2P54819 239 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 MDM2Q00987 491 aaPredicted RBP20.39■□□□□ 0.85
MRPL28-208ENST00000469744 CDC37Q16543 378 aaPredicted RBP20.39■□□□□ 0.85
MRPL28-208ENST00000469744 ASPRV1Q53RT3 343 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 CHST3Q7LGC8 479 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 FBXO16Q8IX29 292 aaPredicted RBP20.39■□□□□ 0.85
MRPL28-208ENST00000469744 ADGRF4Q8IZF3 695 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 STAG2Q8N3U4 1231 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 SENP2Q9HC62 589 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 WDR19Q8NEZ3 1342 aa20.39■□□□□ 0.85
MRPL28-208ENST00000469744 A0A1W2PQ45 241 aaPredicted RBP20.38■□□□□ 0.85
MRPL28-208ENST00000469744 A0A1W2PQY0 241 aa20.38■□□□□ 0.85
MRPL28-208ENST00000469744 DHX16O60231 1041 aaKnown RBP20.38■□□□□ 0.85
MRPL28-208ENST00000469744 RALYLQ86SE5 291 aaKnown RBP20.38■□□□□ 0.85
MRPL28-208ENST00000469744 VAT1LQ9HCJ6 419 aa20.38■□□□□ 0.85
MRPL28-208ENST00000469744 PDGFCQ9NRA1 345 aa20.38■□□□□ 0.85
MRPL28-208ENST00000469744 PDRG1Q9NUG6 133 aa20.38■□□□□ 0.85
MRPL28-208ENST00000469744 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.38■□□□□ 0.85
MRPL28-208ENST00000469744 IFIT3O14879 490 aaKnown RBP20.37■□□□□ 0.85
MRPL28-208ENST00000469744 BRD1O95696 1058 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 C6orf222P0C671 652 aaPredicted RBP20.37■□□□□ 0.85
MRPL28-208ENST00000469744 KCNA10Q16322 511 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
MRPL28-208ENST00000469744 KLHDC9Q8NEP7 349 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 ZDHHC9Q9Y397 364 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 LTBP2Q14767 1821 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 ALDH5A1P51649 535 aaPredicted RBP20.37■□□□□ 0.85
MRPL28-208ENST00000469744 ACLYP53396 1101 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 SNX17Q15036 470 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 ANKRD1Q15327 319 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 TMEM63BQ5T3F8 832 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 RNF207Q6ZRF8 634 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 NCOA7Q8NI08 942 aa20.37■□□□□ 0.85
MRPL28-208ENST00000469744 PRDM5Q9NQX1 630 aaPredicted RBP20.37■□□□□ 0.85
MRPL28-208ENST00000469744 BAZ2BQ9UIF8 2168 aaKnown RBP20.37■□□□□ 0.85
MRPL28-208ENST00000469744 ANTXR2P58335 489 aa20.36■□□□□ 0.85
MRPL28-208ENST00000469744 RPS6P62753 249 aaKnown RBP20.36■□□□□ 0.85
MRPL28-208ENST00000469744 TNFAIP2Q03169 654 aa20.36■□□□□ 0.85
MRPL28-208ENST00000469744 QRICH1Q2TAL8 776 aa20.36■□□□□ 0.85
MRPL28-208ENST00000469744 ADCK5Q3MIX3 580 aa20.36■□□□□ 0.85
MRPL28-208ENST00000469744 CCSAPQ6IQ19 270 aaPredicted RBP20.36■□□□□ 0.85
MRPL28-208ENST00000469744 UBE2OQ9C0C9 1292 aaKnown RBP20.36■□□□□ 0.85
MRPL28-208ENST00000469744 JMJD4Q9H9V9 463 aa20.36■□□□□ 0.85
MRPL28-208ENST00000469744 PDIA4P13667 645 aaKnown RBP20.35■□□□□ 0.85
MRPL28-208ENST00000469744 BMP8BP34820 402 aa20.35■□□□□ 0.85
MRPL28-208ENST00000469744 BEX3Q00994 111 aa20.35■□□□□ 0.85
MRPL28-208ENST00000469744 TLE2Q04725 743 aa20.35■□□□□ 0.85
MRPL28-208ENST00000469744 TSEN34Q9BSV6 310 aaKnown RBP20.35■□□□□ 0.85
MRPL28-208ENST00000469744 UPF3AQ9H1J1 476 aaKnown RBP20.35■□□□□ 0.85
MRPL28-208ENST00000469744 ADD3Q9UEY8 706 aaKnown RBP20.35■□□□□ 0.85
MRPL28-208ENST00000469744 MAD2L2Q9UI95 211 aa20.35■□□□□ 0.85
MRPL28-208ENST00000469744 PNMA2Q9UL42 364 aa20.35■□□□□ 0.85
MRPL28-208ENST00000469744 KLRF2D3W0D1 207 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 CTAGE5O15320 804 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 SMPD1P17405 629 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 GJA9P57773 515 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 COL9A3Q14050 684 aaPredicted RBP20.34■□□□□ 0.85
MRPL28-208ENST00000469744 WTAPQ15007 396 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 GNASQ5JWF2 1037 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 L1TD1Q5T7N2 865 aaKnown RBP20.34■□□□□ 0.85
MRPL28-208ENST00000469744 TAPT1Q6NXT6 567 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 BLOC1S2Q6QNY1 142 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 SH3RF1Q7Z6J0 888 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 MB21D2Q8IYB1 491 aaPredicted RBP20.34■□□□□ 0.85
MRPL28-208ENST00000469744 MORC4Q8TE76 937 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 TBC1D5Q92609 795 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 SPC25Q9HBM1 224 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 GPHNQ9NQX3 736 aaPredicted RBP20.34■□□□□ 0.85
MRPL28-208ENST00000469744 STARD7Q9NQZ5 370 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 PRKAG2Q9UGJ0 569 aa20.34■□□□□ 0.85
MRPL28-208ENST00000469744 A0A1W2PPC1 479 aa20.33■□□□□ 0.85
MRPL28-208ENST00000469744 ERICH2A1L162 156 aa20.33■□□□□ 0.85
MRPL28-208ENST00000469744 SOX1O00570 391 aaPredicted RBP20.33■□□□□ 0.85
MRPL28-208ENST00000469744 PQBP1O60828 265 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms