RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 PLA2G6O60733 806 aa15.23■□□□□ 0.03
TRAPPC12-216ENST00000469400 DUSP28Q4G0W2 176 aa15.23■□□□□ 0.03
TRAPPC12-216ENST00000469400 KCTD1Q719H9 257 aa15.23■□□□□ 0.03
TRAPPC12-216ENST00000469400 LRFN3Q9BTN0 628 aa15.23■□□□□ 0.03
TRAPPC12-216ENST00000469400 COG5Q9UP83 839 aa15.23■□□□□ 0.03
TRAPPC12-216ENST00000469400 TLL1O43897 1013 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 ZFYP08048 801 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 ACTN1P12814 892 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 PURAQ00577 322 aaKnown RBP15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 PDE4BQ07343 736 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 RCSD1Q6JBY9 416 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 NSMFQ6X4W1 530 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 PHOSPHO2Q8TCD6 241 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 ARNTL2Q8WYA1 636 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 SLC9A7Q96T83 725 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 WDR11Q9BZH6 1224 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 POLR3EQ9NVU0 708 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 CCPG1Q9ULG6 757 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 PRR12Q9ULL5 1215 aa15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 ARIH1Q9Y4X5 557 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC12-216ENST00000469400 LRRC37A2A6NM11 1700 aa15.21■□□□□ 0.03
TRAPPC12-216ENST00000469400 ARHGEF15O94989 841 aa15.21■□□□□ 0.03
TRAPPC12-216ENST00000469400 MYL3P08590 195 aa15.21■□□□□ 0.03
TRAPPC12-216ENST00000469400 TAP1Q03518 808 aa15.21■□□□□ 0.03
TRAPPC12-216ENST00000469400 TSHZ3Q63HK5 1081 aa15.21■□□□□ 0.03
TRAPPC12-216ENST00000469400 RASGRP2Q7LDG7 609 aa15.21■□□□□ 0.03
TRAPPC12-216ENST00000469400 NACAP1Q9BZK3 213 aa15.21■□□□□ 0.03
TRAPPC12-216ENST00000469400 HCN4Q9Y3Q4 1203 aa15.21■□□□□ 0.03
TRAPPC12-216ENST00000469400 TRANK1O15050 2925 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 ICAM1P05362 532 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 SLC3A2P08195 630 aaKnown RBP15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 IQCF3P0C7M6 154 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 RFC2P35250 354 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 CPT1AP50416 773 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 PPARAQ07869 468 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 BAATQ14032 418 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 NBPF20Q3BBV1 942 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 FAM47CQ5HY64 1035 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 TMEM31Q5JXX7 168 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 HERC6Q8IVU3 1022 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 PPP1R13LQ8WUF5 828 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 HLA-CQ95604 372 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 MTG1Q9BT17 334 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 CHMP4BQ9H444 224 aaKnown RBP15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 GPHNQ9NQX3 736 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 STX8Q9UNK0 236 aa15.2■□□□□ 0.02
TRAPPC12-216ENST00000469400 RBM47A0AV96 593 aaKnown RBP15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 NMT2O60551 498 aa15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 ALDH5A1P51649 535 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 GRB10Q13322 594 aa15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 PPP4R3BQ5MIZ7 849 aa15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 RETREG2Q8NC44 543 aa15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 OR6J1Q8NGC5 347 aa15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 GPATCH3Q96I76 525 aa15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 SEC62Q99442 399 aaKnown RBP15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 FTOQ9C0B1 505 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 NAPBQ9H115 298 aa15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 IL17RBQ9NRM6 502 aa15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 ADD3Q9UEY8 706 aaKnown RBP15.19■□□□□ 0.02
TRAPPC12-216ENST00000469400 KIF28PB7ZC32 967 aa15.18■□□□□ 0.02
TRAPPC12-216ENST00000469400 LPXNO60711 386 aa15.18■□□□□ 0.02
TRAPPC12-216ENST00000469400 NFRKBQ6P4R8 1299 aa15.18■□□□□ 0.02
TRAPPC12-216ENST00000469400 SPRED2Q7Z698 418 aa15.18■□□□□ 0.02
TRAPPC12-216ENST00000469400 KHSRPQ92945 711 aaKnown RBP eCLIP15.18■□□□□ 0.026e-11■■■□□ 18.6
TRAPPC12-216ENST00000469400 RANBP17Q9H2T7 1088 aaKnown RBP15.18■□□□□ 0.02
TRAPPC12-216ENST00000469400 INCENPQ9NQS7 918 aa15.18■□□□□ 0.02
TRAPPC12-216ENST00000469400 MTMR7Q9Y216 660 aa15.18■□□□□ 0.02
TRAPPC12-216ENST00000469400 SCN5AQ14524 2016 aa15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 LOC102724159A0A0B4J2E5 919 aa15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 TSPY2A6NKD2 308 aa15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 NFIBO00712 420 aa15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 SLC16A2P36021 539 aa15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 PWP2Q15269 919 aaKnown RBP15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 BRDTQ58F21 947 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 TTBK2Q6IQ55 1244 aa15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 C11orf16Q9NQ32 467 aa15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRAPPC12-216ENST00000469400 LCTP09848 1927 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 PTPDC1A2A3K4 754 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 A6NJR5 290 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 KPNA6O60684 536 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 GPR37L1O60883 481 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 BAIAP3O94812 1187 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 PTPN11Q06124 597 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 BFSP2Q13515 415 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 CCDC96Q2M329 555 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 LRRFIP1Q32MZ4 808 aaKnown RBP15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 DCAF4Q8WV16 495 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 PIEZO1Q92508 2521 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 RAD50Q92878 1312 aa15.16■□□□□ 0.02
TRAPPC12-216ENST00000469400 BRWD1Q9NSI6 2320 aa15.15■□□□□ 0.02
TRAPPC12-216ENST00000469400 SCN10AQ9Y5Y9 1956 aa15.15■□□□□ 0.02
TRAPPC12-216ENST00000469400 FAM86C2PA6NEL3 165 aa15.15■□□□□ 0.02
TRAPPC12-216ENST00000469400 NKRFO15226 690 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRAPPC12-216ENST00000469400 CALML3P27482 149 aa15.15■□□□□ 0.02
TRAPPC12-216ENST00000469400 NOVP48745 357 aa15.15■□□□□ 0.02
TRAPPC12-216ENST00000469400 CTDSPL2Q05D32 466 aa15.15■□□□□ 0.02
TRAPPC12-216ENST00000469400 PPP2R5BQ15173 497 aa15.15■□□□□ 0.02
TRAPPC12-216ENST00000469400 SYDE2Q5VT97 1194 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms