RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 A1CFQ9NQ94 594 aaKnown RBP12.95□□□□□ -0.34
MSH5-214ENST00000468602 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 CPA4Q9UI42 421 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 GJD2Q9UKL4 321 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
MSH5-214ENST00000468602 PCDHA4Q9UN74 947 aa12.95□□□□□ -0.34
MSH5-214ENST00000468602 ZNFX1Q9P2E3 1918 aaKnown RBP12.95□□□□□ -0.34
MSH5-214ENST00000468602 CASP8AP2Q9UKL3 1982 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 hCG_1642624A0A1W2PR95 340 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 SMCO2A6NFE2 343 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 NFIBO00712 420 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 XRCC5P13010 732 aaKnown RBP12.94□□□□□ -0.34
MSH5-214ENST00000468602 ALAS1P13196 640 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 SYT1P21579 422 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 PRMT2P55345 433 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 SNAP25P60880 206 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 MUM1L1Q5H9M0 696 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 XRRA1Q6P2D8 792 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 GPR142Q7Z601 462 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 PLEKHH3Q7Z736 793 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
MSH5-214ENST00000468602 SOCS4Q8WXH5 440 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 AIFM3Q96NN9 605 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 VPS54Q9P1Q0 977 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 PLXNB2O15031 1838 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 LCTP09848 1927 aa12.94□□□□□ -0.34
MSH5-214ENST00000468602 RPTORQ8N122 1335 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 GCOM1H8Y6P7 765 aaPredicted RBP12.93□□□□□ -0.34
MSH5-214ENST00000468602 TBC1D8O95759 1140 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 POLR2MP0CAP2 368 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 FCER1AP12319 257 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 ADCY7P51828 1080 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 RPS6P62753 249 aaKnown RBP12.93□□□□□ -0.34
MSH5-214ENST00000468602 KCTD2Q14681 263 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 ARHGEF6Q15052 776 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 USH1GQ495M9 461 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 LARP1BQ659C4 914 aaKnown RBP12.93□□□□□ -0.34
MSH5-214ENST00000468602 RNF207Q6ZRF8 634 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 SYTL5Q8TDW5 730 aaPredicted RBP12.93□□□□□ -0.34
MSH5-214ENST00000468602 ERO1AQ96HE7 468 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 BEGAINQ9BUH8 593 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
MSH5-214ENST00000468602 STX6O43752 255 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 FKTNO75072 461 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 HSP90AA1P07900 732 aaKnown RBP12.92□□□□□ -0.34
MSH5-214ENST00000468602 CYP3A4P08684 503 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 EDNRBP24530 442 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 CTGFP29279 349 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 FCGRTP55899 365 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 NLRP5P59047 1200 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 TRIM29Q14134 588 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 PLS1Q14651 629 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 ZNF792Q3KQV3 632 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 MOXD1Q6UVY6 613 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 MAMDC4Q6UXC1 1216 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 NCAPG2Q86XI2 1143 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 REXO1Q8N1G1 1221 aaKnown RBP12.92□□□□□ -0.34
MSH5-214ENST00000468602 IWS1Q96ST2 819 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 BRMS1Q9HCU9 246 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 PCDHA6Q9UN73 950 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 MTMR6Q9Y217 621 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 PCDHA8Q9Y5H6 950 aa12.92□□□□□ -0.34
MSH5-214ENST00000468602 MORC2Q9Y6X9 1032 aaPredicted RBP12.92□□□□□ -0.34
MSH5-214ENST00000468602 PEX10O60683 326 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 STAM2O75886 525 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 CIITAP33076 1130 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 KRT2P35908 639 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 SREBF1P36956 1147 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 TRAPPC10P48553 1259 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 ORC2Q13416 577 aaPredicted RBP12.91□□□□□ -0.34
MSH5-214ENST00000468602 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
MSH5-214ENST00000468602 OLFML2BQ68BL8 750 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 KRT25Q7Z3Z0 450 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 DIS3L2Q8IYB7 885 aaKnown RBP12.91□□□□□ -0.34
MSH5-214ENST00000468602 TRMT44Q8IYL2 757 aaKnown RBP12.91□□□□□ -0.34
MSH5-214ENST00000468602 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 FGD4Q96M96 766 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 MMP19Q99542 508 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
MSH5-214ENST00000468602 SLC5A4Q9NY91 659 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
MSH5-214ENST00000468602 IVNS1ABPQ9Y6Y0 642 aa12.91□□□□□ -0.34
MSH5-214ENST00000468602 PPFIA3O75145 1194 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 BRD1O95696 1058 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 HOXD10P28358 340 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 ADORA2AP29274 412 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 USP11P51784 963 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 NUCB2P80303 420 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 BAATQ14032 418 aaPredicted RBP12.9□□□□□ -0.34
MSH5-214ENST00000468602 KIF22Q14807 665 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 USP17L6PQ6QN14 398 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 BRAPQ7Z569 592 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 ANKRD35Q8N283 1001 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 ZNF296Q8WUU4 475 aaPredicted RBP12.9□□□□□ -0.34
MSH5-214ENST00000468602 PIBF1Q8WXW3 757 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 TBC1D5Q92609 795 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 MBOAT7Q96N66 472 aa12.9□□□□□ -0.34
MSH5-214ENST00000468602 NUDT12Q9BQG2 462 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms