RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PRO3102Q9H379 93 aa16.81■□□□□ 0.28
COL27A1-203ENST00000468565 KIAA1217Q5T5P2 1943 aa16.81■□□□□ 0.28
COL27A1-203ENST00000468565 ADCY6O43306 1168 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 CALML3P27482 149 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 CST5P28325 142 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-203ENST00000468565 ADCYAP1R1P41586 468 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
COL27A1-203ENST00000468565 RPS6P62753 249 aaKnown RBP16.8■□□□□ 0.28
COL27A1-203ENST00000468565 SNX17Q15036 470 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 C1orf53Q5VUE5 145 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 SLC39A5Q6ZMH5 540 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 FBXO11Q86XK2 927 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 DNERQ8NFT8 737 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 TMEM87BQ96K49 555 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 PURBQ96QR8 312 aaKnown RBP16.8■□□□□ 0.28
COL27A1-203ENST00000468565 VAT1LQ9HCJ6 419 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 TRIOBPQ9H2D6 2365 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 LTBP2Q14767 1821 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 PRC1O43663 620 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 VASPP50552 380 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-203ENST00000468565 ATN1P54259 1190 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-203ENST00000468565 GJA9P57773 515 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 NKX3-2P78367 333 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 MPHOSPH6Q99547 160 aaKnown RBP16.8■□□□□ 0.28
COL27A1-203ENST00000468565 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 AMNQ9BXJ7 453 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 LY9Q9HBG7 655 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 SPC25Q9HBM1 224 aa16.8■□□□□ 0.28
COL27A1-203ENST00000468565 ZMYND8Q9ULU4 1186 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-203ENST00000468565 MRPL11Q9Y3B7 192 aaKnown RBP16.8■□□□□ 0.28
COL27A1-203ENST00000468565 MOXD2PA6NHM9 499 aa16.79■□□□□ 0.28
COL27A1-203ENST00000468565 ZBTB5O15062 677 aa16.79■□□□□ 0.28
COL27A1-203ENST00000468565 DDAH1O94760 285 aa16.79■□□□□ 0.28
COL27A1-203ENST00000468565 RTP1P59025 263 aa16.79■□□□□ 0.28
COL27A1-203ENST00000468565 CCSAPQ6IQ19 270 aaPredicted RBP16.79■□□□□ 0.28
COL27A1-203ENST00000468565 MCF2L2Q86YR7 1114 aa16.79■□□□□ 0.28
COL27A1-203ENST00000468565 TMTC2Q8N394 836 aa16.79■□□□□ 0.28
COL27A1-203ENST00000468565 RIOX1Q9H6W3 641 aa16.79■□□□□ 0.28
COL27A1-203ENST00000468565 TNFAIP2Q03169 654 aa16.78■□□□□ 0.28
COL27A1-203ENST00000468565 IQSEC1Q6DN90 963 aa16.78■□□□□ 0.28
COL27A1-203ENST00000468565 TAPT1Q6NXT6 567 aa16.78■□□□□ 0.28
COL27A1-203ENST00000468565 FBXO16Q8IX29 292 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-203ENST00000468565 PCSK9Q8NBP7 692 aaKnown RBP16.78■□□□□ 0.28
COL27A1-203ENST00000468565 FERMT2Q96AC1 680 aa16.78■□□□□ 0.28
COL27A1-203ENST00000468565 GNEQ9Y223 722 aaKnown RBP16.78■□□□□ 0.28
COL27A1-203ENST00000468565 A0A1W2PQ45 241 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-203ENST00000468565 A0A1W2PQY0 241 aa16.78■□□□□ 0.28
COL27A1-203ENST00000468565 SH2B2O14492 632 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-203ENST00000468565 EDNRBP24530 442 aa16.78■□□□□ 0.28
COL27A1-203ENST00000468565 TRAF1Q13077 416 aa16.78■□□□□ 0.28
COL27A1-203ENST00000468565 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
COL27A1-203ENST00000468565 GDF15Q99988 308 aa16.78■□□□□ 0.28
COL27A1-203ENST00000468565 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
COL27A1-203ENST00000468565 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
COL27A1-203ENST00000468565 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-203ENST00000468565 A0A1W2PPC1 479 aa16.77■□□□□ 0.28
COL27A1-203ENST00000468565 B4DLN1 442 aa16.77■□□□□ 0.28
COL27A1-203ENST00000468565 C6orf222P0C671 652 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-203ENST00000468565 SYN1P17600 705 aa16.77■□□□□ 0.28
COL27A1-203ENST00000468565 LIFRP42702 1097 aa16.77■□□□□ 0.28
COL27A1-203ENST00000468565 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.28
COL27A1-203ENST00000468565 ACLYP53396 1101 aa16.77■□□□□ 0.28
COL27A1-203ENST00000468565 GHRHRQ02643 423 aa16.77■□□□□ 0.28
COL27A1-203ENST00000468565 SLC35G1Q2M3R5 365 aa16.77■□□□□ 0.28
COL27A1-203ENST00000468565 TSGA10IPQ3SY00 556 aa16.77■□□□□ 0.28
COL27A1-203ENST00000468565 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.28
COL27A1-203ENST00000468565 Q9Y3F1 56 aa16.77■□□□□ 0.28
COL27A1-203ENST00000468565 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 SMPD1P17405 629 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 BMP8BP34820 402 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 KCNA10Q16322 511 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 EEPD1Q7L9B9 569 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 HSCBQ8IWL3 235 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 SYTL5Q8TDW5 730 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-203ENST00000468565 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 PDGFCQ9NRA1 345 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 RBM47A0AV96 593 aaKnown RBP16.76■□□□□ 0.27
COL27A1-203ENST00000468565 CTAGE5O15320 804 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 CYTH3O43739 400 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 PPP1R11O60927 126 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-203ENST00000468565 KIF5BP33176 963 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 PDE4DQ08499 809 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 TRIM60Q495X7 471 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 CTCFLQ8NI51 663 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-203ENST00000468565 NEK1Q96PY6 1258 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 GPHNQ9NQX3 736 aaPredicted RBP16.76■□□□□ 0.27
COL27A1-203ENST00000468565 MAP3K20Q9NYL2 800 aaKnown RBP16.76■□□□□ 0.27
COL27A1-203ENST00000468565 ATP11BQ9Y2G3 1177 aa16.76■□□□□ 0.27
COL27A1-203ENST00000468565 RANBP2P49792 3224 aaKnown RBP16.75■□□□□ 0.27
COL27A1-203ENST00000468565 CCDC69A6NI79 296 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 SMARCA1P28370 1054 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
COL27A1-203ENST00000468565 KRT32Q14532 448 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 NFXL1Q6ZNB6 911 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 NOL8Q76FK4 1167 aaKnown RBP16.75■□□□□ 0.27
COL27A1-203ENST00000468565 TLK2Q86UE8 772 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 SAMD3Q8N6K7 520 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 TBC1D5Q92609 795 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms