RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FOXN1O15353 648 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 CFBP00751 764 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 PDCP20941 246 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 HSD17B4P51659 736 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 CD99L2Q8TCZ2 262 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 BICD2Q8TD16 824 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 TRIM47Q96LD4 638 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 ARHGAP39Q9C0H5 1083 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 CYP39A1Q9NYL5 469 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 DAXXQ9UER7 740 aaPredicted RBP17.47■□□□□ 0.39
SNIP1-202ENST00000468040 MGAMO43451 1857 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 SMCHD1A6NHR9 2005 aa17.47■□□□□ 0.39
SNIP1-202ENST00000468040 ECM2O94769 699 aaPredicted RBP17.46■□□□□ 0.39
SNIP1-202ENST00000468040 HSPA8P11142 646 aaKnown RBP17.46■□□□□ 0.39
SNIP1-202ENST00000468040 HOXD10P28358 340 aa17.46■□□□□ 0.39
SNIP1-202ENST00000468040 ADORA2AP29274 412 aa17.46■□□□□ 0.39
SNIP1-202ENST00000468040 CTGFP29279 349 aa17.46■□□□□ 0.39
SNIP1-202ENST00000468040 RPS6P62753 249 aaKnown RBP17.46■□□□□ 0.39
SNIP1-202ENST00000468040 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
SNIP1-202ENST00000468040 NUDT12Q9BQG2 462 aa17.46■□□□□ 0.39
SNIP1-202ENST00000468040 PHF20Q9BVI0 1012 aa17.46■□□□□ 0.39
SNIP1-202ENST00000468040 BRMS1Q9HCU9 246 aa17.46■□□□□ 0.39
SNIP1-202ENST00000468040 SLC5A4Q9NY91 659 aa17.46■□□□□ 0.39
SNIP1-202ENST00000468040 POTEB2H3BUK9 544 aa17.45■□□□□ 0.38
SNIP1-202ENST00000468040 MORN1Q5T089 497 aa17.45■□□□□ 0.38
SNIP1-202ENST00000468040 MCTP2Q6DN12 878 aa17.45■□□□□ 0.38
SNIP1-202ENST00000468040 SLC30A10Q6XR72 485 aa17.45■□□□□ 0.38
SNIP1-202ENST00000468040 DAGLBQ8NCG7 672 aa17.45■□□□□ 0.38
SNIP1-202ENST00000468040 FBXO18Q8NFZ0 1043 aa17.45■□□□□ 0.38
SNIP1-202ENST00000468040 SHISA4Q96DD7 197 aa17.45■□□□□ 0.38
SNIP1-202ENST00000468040 PCDHA4Q9UN74 947 aa17.45■□□□□ 0.38
SNIP1-202ENST00000468040 KCNJ14Q9UNX9 436 aa17.45■□□□□ 0.38
SNIP1-202ENST00000468040 DNAJC25-GNG10A0A024R161 153 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 MEIS2O14770 477 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 MMP1P03956 469 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 PDIA4P13667 645 aaKnown RBP17.44■□□□□ 0.38
SNIP1-202ENST00000468040 RGS2P41220 211 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 FOSBP53539 338 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 PRMT2P55345 433 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 MAP2K5Q13163 448 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNIP1-202ENST00000468040 LARP1BQ659C4 914 aaKnown RBP17.44■□□□□ 0.38
SNIP1-202ENST00000468040 KRT40Q6A162 431 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 DPP9Q86TI2 863 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 REXO1Q8N1G1 1221 aaKnown RBP17.44■□□□□ 0.38
SNIP1-202ENST00000468040 SYTL5Q8TDW5 730 aaPredicted RBP17.44■□□□□ 0.38
SNIP1-202ENST00000468040 TBC1D5Q92609 795 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 GJB4Q9NTQ9 266 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 DIS3Q9Y2L1 958 aaKnown RBP17.44■□□□□ 0.38
SNIP1-202ENST00000468040 PCNTO95613 3336 aa17.44■□□□□ 0.38
SNIP1-202ENST00000468040 SPDYE3A6NKU9 549 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 H3BQV1 296 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 FOSP01100 380 aaPredicted RBP17.43■□□□□ 0.38
SNIP1-202ENST00000468040 HOXA13P31271 388 aaPredicted RBP17.43■□□□□ 0.38
SNIP1-202ENST00000468040 KRT2P35908 639 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 AP3B2Q13367 1082 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 IFFO2Q5TF58 517 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 USP17L6PQ6QN14 398 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 BLIDQ8IZY5 108 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 FAM133AQ8N9E0 248 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 SPRYD3Q8NCJ5 442 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 ADD3Q9UEY8 706 aaKnown RBP17.43■□□□□ 0.38
SNIP1-202ENST00000468040 GJD2Q9UKL4 321 aa17.43■□□□□ 0.38
SNIP1-202ENST00000468040 ZSWIM8A7E2V4 1837 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 PGK2P07205 417 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 HOXC6P09630 235 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 CLK2P49760 499 aaKnown RBP17.42■□□□□ 0.38
SNIP1-202ENST00000468040 LBX1P52954 281 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 GUCY1B3Q02153 619 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 NPY5RQ15761 445 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 UBE2SQ16763 222 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 FCHSD1Q86WN1 690 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 DNERQ8NFT8 737 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 USP6NLQ92738 828 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 MPHOSPH6Q99547 160 aaKnown RBP17.42■□□□□ 0.38
SNIP1-202ENST00000468040 APBA2Q99767 749 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 EHMT1Q9H9B1 1298 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 SRRDQ9UH36 339 aa17.42■□□□□ 0.38
SNIP1-202ENST00000468040 LOC102724159A0A0B4J2E5 919 aa17.41■□□□□ 0.38
SNIP1-202ENST00000468040 COBLO75128 1261 aa17.41■□□□□ 0.38
SNIP1-202ENST00000468040 XRCC5P13010 732 aaKnown RBP17.41■□□□□ 0.38
SNIP1-202ENST00000468040 FLT3LGP49771 235 aa17.41■□□□□ 0.38
SNIP1-202ENST00000468040 CAP1Q01518 475 aa17.41■□□□□ 0.38
SNIP1-202ENST00000468040 PRKCZQ05513 592 aa17.41■□□□□ 0.38
SNIP1-202ENST00000468040 PWP2Q15269 919 aaKnown RBP17.41■□□□□ 0.38
SNIP1-202ENST00000468040 ZNF792Q3KQV3 632 aa17.41■□□□□ 0.38
SNIP1-202ENST00000468040 ZNF467Q7Z7K2 595 aaPredicted RBP17.41■□□□□ 0.38
SNIP1-202ENST00000468040 DIS3L2Q8IYB7 885 aaKnown RBP17.41■□□□□ 0.38
SNIP1-202ENST00000468040 NSUN6Q8TEA1 469 aaKnown RBP17.41■□□□□ 0.38
SNIP1-202ENST00000468040 RMDN3Q96TC7 470 aa17.41■□□□□ 0.38
SNIP1-202ENST00000468040 COL20A1Q9P218 1284 aa17.41■□□□□ 0.38
SNIP1-202ENST00000468040 TRIM17Q9Y577 477 aa17.41■□□□□ 0.38
SNIP1-202ENST00000468040 B4DLN1 442 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 M0R2N6 131 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 CYP2B6P20813 491 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 SYT1P21579 422 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 CNTN2Q02246 1040 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 IRF5Q13568 498 aa17.4■□□□□ 0.38
SNIP1-202ENST00000468040 OTOP1Q7RTM1 612 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms