RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 FBXO28Q9NVF7 368 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 YBX2Q9Y2T7 364 aaKnown RBP12.84□□□□□ -0.35
PRPF3-203ENST00000467514 TMX2Q9Y320 296 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 NEDD4P46934 1319 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 SYNGAP1Q96PV0 1343 aa12.84□□□□□ -0.35
PRPF3-203ENST00000467514 MCM3APO60318 1980 aa12.83□□□□□ -0.35
PRPF3-203ENST00000467514 SMIM22K7EJ46 135 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 VWA5AO00534 786 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 AKR1B1P15121 316 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 CCL23P55773 120 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 GABPAQ06546 454 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 ME3Q16798 604 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 RASIP1Q5U651 963 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 CYB5R4Q7L1T6 521 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 MSL3Q8N5Y2 521 aaKnown RBP12.83□□□□□ -0.36
PRPF3-203ENST00000467514 KLHDC9Q8NEP7 349 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 DYNLL2Q96FJ2 89 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 LARP6Q9BRS8 491 aaKnown RBP12.83□□□□□ -0.36
PRPF3-203ENST00000467514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
PRPF3-203ENST00000467514 XIRP2A4UGR9 3374 aa12.83□□□□□ -0.36
PRPF3-203ENST00000467514 REV3LO60673 3130 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 BAZ2AQ9UIF9 1905 aaKnown RBP12.82□□□□□ -0.36
PRPF3-203ENST00000467514 USP17L12C9JPN9 530 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 USP17L21D6R901 530 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 PRC1O43663 620 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 CYP2D6P10635 497 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 BMP1P13497 986 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 MCM5P33992 734 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 ACVR2BQ13705 512 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 FAM126BQ8IXS8 530 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 RPUSD2Q8IZ73 545 aaKnown RBP12.82□□□□□ -0.36
PRPF3-203ENST00000467514 ANKRD35Q8N283 1001 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 TEX13BQ9BXU2 312 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 CNNM2Q9H8M5 875 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.82□□□□□ -0.36
PRPF3-203ENST00000467514 PPP1R9AQ9ULJ8 1098 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 ISY1Q9ULR0 285 aaKnown RBP12.82□□□□□ -0.36
PRPF3-203ENST00000467514 CHD7Q9P2D1 2997 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 LRRC37A2A6NM11 1700 aa12.82□□□□□ -0.36
PRPF3-203ENST00000467514 CYP2D7A0A087X1C5 515 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 PCP11498 1178 aaKnown RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 MYOGP15173 224 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 ATP2A2P16615 1042 aaKnown RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 CST5P28325 142 aaPredicted RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 CDK7P50613 346 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 IRX5P78411 483 aaPredicted RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 EVX2Q03828 476 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 CCDC144BQ3MJ40 725 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 C12orf60Q5U649 245 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 RALYLQ86SE5 291 aaKnown RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 CPXCR1Q8N123 301 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 IGDCC4Q8TDY8 1250 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 BRF1Q92994 677 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 MTA3Q9BTC8 594 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 LRRC2Q9BYS8 371 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 KRT23Q9C075 422 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 ABHD16BQ9H3Z7 469 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 RNF41Q9H4P4 317 aaPredicted RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 CERS4Q9HA82 394 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 ARPP21Q9UBL0 812 aaPredicted RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 ARIH1Q9Y4X5 557 aaPredicted RBP12.81□□□□□ -0.36
PRPF3-203ENST00000467514 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
PRPF3-203ENST00000467514 FAM86C2PA6NEL3 165 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 B4E1Z4 1266 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 SH2B2O14492 632 aaPredicted RBP12.8□□□□□ -0.36
PRPF3-203ENST00000467514 ORC4O43929 436 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 ZEB2O60315 1214 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 PFKFB2O60825 505 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 SNAI1O95863 264 aaPredicted RBP12.8□□□□□ -0.36
PRPF3-203ENST00000467514 HSP90AA1P07900 732 aaKnown RBP12.8□□□□□ -0.36
PRPF3-203ENST00000467514 BEX3Q00994 111 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 TRDNQ13061 729 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 TMEM67Q5HYA8 995 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 MFSD6Q6ZSS7 791 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 CHST3Q7LGC8 479 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 ZNF274Q96GC6 653 aaPredicted RBP12.8□□□□□ -0.36
PRPF3-203ENST00000467514 SLF1Q9BQI6 1058 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 ZSWIM5Q9P217 1185 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 ZNF214Q9UL59 606 aaPredicted RBP12.8□□□□□ -0.36
PRPF3-203ENST00000467514 COG5Q9UP83 839 aa12.8□□□□□ -0.36
PRPF3-203ENST00000467514 MINDY4BA8MYZ0 360 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 ZBED4O75132 1171 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 PDIA3P30101 505 aaKnown RBP12.79□□□□□ -0.36
PRPF3-203ENST00000467514 NT5C2P49902 561 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 GJA9P57773 515 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 CCSAPQ6IQ19 270 aaPredicted RBP12.79□□□□□ -0.36
PRPF3-203ENST00000467514 CXCL17Q6UXB2 119 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 ARMCX2Q7L311 632 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 ALYREFQ86V81 257 aaKnown RBP12.79□□□□□ -0.36
PRPF3-203ENST00000467514 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
PRPF3-203ENST00000467514 GTF3C6Q969F1 213 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms