RNA–Protein interactions for RNA: ENST00000467350.1

RERE-209, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-209ENST00000467350 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
RERE-209ENST00000467350 KPNA6O60684 536 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 SUPT20HL2P0C7V6 817 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 SMPD1P17405 629 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 CPT1AP50416 773 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
RERE-209ENST00000467350 TRAF1Q13077 416 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 ITGA7Q13683 1181 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 DUSP28Q4G0W2 176 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 ASPRV1Q53RT3 343 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 TAPT1Q6NXT6 567 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 Q7L0L9 218 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 TBC1D10CQ8IV04 446 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 RNPC3Q96LT9 517 aaKnown RBP12.11□□□□□ -0.47
RERE-209ENST00000467350 WDR11Q9BZH6 1224 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 IL25Q9H293 177 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 ZSWIM5Q9P217 1185 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 RLFQ13129 1914 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 RAD50Q92878 1312 aa12.11□□□□□ -0.47
RERE-209ENST00000467350 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.1□□□□□ -0.47
RERE-209ENST00000467350 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.1□□□□□ -0.47
RERE-209ENST00000467350 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.1□□□□□ -0.47
RERE-209ENST00000467350 B4E1Z4 1266 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 NFIBO00712 420 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 DHX16O60231 1041 aaKnown RBP12.1□□□□□ -0.47
RERE-209ENST00000467350 PARP1P09874 1014 aaKnown RBP12.1□□□□□ -0.47
RERE-209ENST00000467350 BEX3Q00994 111 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 BMP2KLQ5H9B9 411 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 C9orf50Q5SZB4 431 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 IFIT1BQ5T764 474 aaKnown RBP12.1□□□□□ -0.47
RERE-209ENST00000467350 CXCL17Q6UXB2 119 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 FBXO16Q8IX29 292 aaPredicted RBP12.1□□□□□ -0.47
RERE-209ENST00000467350 SCFD2Q8WU76 684 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 CLEC4DQ8WXI8 215 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 MTIF3Q9H2K0 278 aaKnown RBP12.1□□□□□ -0.47
RERE-209ENST00000467350 PDGFCQ9NRA1 345 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 TBX21Q9UL17 535 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 MRPL11Q9Y3B7 192 aaKnown RBP12.1□□□□□ -0.47
RERE-209ENST00000467350 ABCB11O95342 1321 aa12.1□□□□□ -0.47
RERE-209ENST00000467350 ERICH2A1L162 156 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 CTAGE5O15320 804 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 ADCY6O43306 1168 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 GOLGA8HP0CJ92 632 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 ITGB8P26012 769 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 CHMLP26374 656 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 RPS6P62753 249 aaKnown RBP12.09□□□□□ -0.47
RERE-209ENST00000467350 SART3Q15020 963 aaKnown RBP12.09□□□□□ -0.47
RERE-209ENST00000467350 FAM126BQ8IXS8 530 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 SLC43A3Q8NBI5 491 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 NSUN6Q8TEA1 469 aaKnown RBP12.09□□□□□ -0.47
RERE-209ENST00000467350 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 SEMA6BQ9H3T3 888 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 NEDD4P46934 1319 aa12.09□□□□□ -0.47
RERE-209ENST00000467350 RANBP2P49792 3224 aaKnown RBP12.09□□□□□ -0.47
RERE-209ENST00000467350 TMEM265A0A087WTH1 108 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 RBM47A0AV96 593 aaKnown RBP12.08□□□□□ -0.48
RERE-209ENST00000467350 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
RERE-209ENST00000467350 TTLL4Q14679 1199 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 PPP2R5BQ15173 497 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 USH1GQ495M9 461 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 PSRC1Q6PGN9 363 aaPredicted RBP12.08□□□□□ -0.48
RERE-209ENST00000467350 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 FBXO11Q86XK2 927 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 RPUSD2Q8IZ73 545 aaKnown RBP12.08□□□□□ -0.48
RERE-209ENST00000467350 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 SAMD3Q8N6K7 520 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 ENAHQ8N8S7 591 aaPredicted RBP12.08□□□□□ -0.48
RERE-209ENST00000467350 PURBQ96QR8 312 aaKnown RBP12.08□□□□□ -0.48
RERE-209ENST00000467350 IWS1Q96ST2 819 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 HIPK3Q9H422 1215 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
RERE-209ENST00000467350 PARP14Q460N5 1801 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 TNKSO95271 1327 aa12.08□□□□□ -0.48
RERE-209ENST00000467350 MYH4Q9Y623 1939 aa12.07□□□□□ -0.48
RERE-209ENST00000467350 CD4P01730 458 aa12.07□□□□□ -0.48
RERE-209ENST00000467350 TXNP10599 105 aaKnown RBP12.07□□□□□ -0.48
RERE-209ENST00000467350 STXBP2Q15833 593 aa12.07□□□□□ -0.48
RERE-209ENST00000467350 CDC37Q16543 378 aaPredicted RBP12.07□□□□□ -0.48
RERE-209ENST00000467350 SLC30A10Q6XR72 485 aa12.07□□□□□ -0.48
RERE-209ENST00000467350 RALYLQ86SE5 291 aaKnown RBP12.07□□□□□ -0.48
RERE-209ENST00000467350 OR6J1Q8NGC5 347 aa12.07□□□□□ -0.48
RERE-209ENST00000467350 FAM161BQ96MY7 647 aa12.07□□□□□ -0.48
RERE-209ENST00000467350 MTG1Q9BT17 334 aaPredicted RBP12.07□□□□□ -0.48
RERE-209ENST00000467350 AMNQ9BXJ7 453 aa12.07□□□□□ -0.48
RERE-209ENST00000467350 ASTN1O14525 1302 aa12.07□□□□□ -0.48
RERE-209ENST00000467350 KLRF2D3W0D1 207 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 SGSM2O43147 1006 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 FGBP02675 491 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 MYL3P08590 195 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 CSF2RAP15509 400 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 EDNRBP24530 442 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 EPHB4P54760 987 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 ARHGEF16Q5VV41 709 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 NCOA7Q8NI08 942 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 IL23AQ9NPF7 189 aa12.06□□□□□ -0.48
RERE-209ENST00000467350 A6NJR5 290 aa12.05□□□□□ -0.48
RERE-209ENST00000467350 DLL1O00548 723 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms