RNA–Protein interactions for RNA: ENST00000467095.5

SYN3-208, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-208ENST00000467095 CCDC82Q8N4S0 544 aa8.12□□□□□ -1.11
SYN3-208ENST00000467095 CHURC1Q8WUH1 139 aa8.12□□□□□ -1.11
SYN3-208ENST00000467095 CLEC4DQ8WXI8 215 aa8.12□□□□□ -1.11
SYN3-208ENST00000467095 FGD4Q96M96 766 aa8.12□□□□□ -1.11
SYN3-208ENST00000467095 PURBQ96QR8 312 aaKnown RBP8.12□□□□□ -1.11
SYN3-208ENST00000467095 SPZ1Q9BXG8 430 aa8.12□□□□□ -1.11
SYN3-208ENST00000467095 VAT1LQ9HCJ6 419 aa8.12□□□□□ -1.11
SYN3-208ENST00000467095 SLC12A7Q9Y666 1083 aa8.12□□□□□ -1.11
SYN3-208ENST00000467095 GOLGA8AA7E2F4 631 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 GOLGA8BA8MQT2 603 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 DPYSL4O14531 572 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 FKTNO75072 461 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 FDPSP14324 419 aaKnown RBP8.11□□□□□ -1.11
SYN3-208ENST00000467095 ERCC3P19447 782 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 SMARCA1P28370 1054 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 RCAN1P53805 252 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 CDC37Q16543 378 aaPredicted RBP8.11□□□□□ -1.11
SYN3-208ENST00000467095 RTN1Q16799 776 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 MORN1Q5T089 497 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 IFFO2Q5TF58 517 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 SNRNP48Q6IEG0 339 aaKnown RBP8.11□□□□□ -1.11
SYN3-208ENST00000467095 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.11□□□□□ -1.11
SYN3-208ENST00000467095 OTOP1Q7RTM1 612 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 GPRC5AQ8NFJ5 357 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 NPLOC4Q8TAT6 608 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 SMCR8Q8TEV9 937 aaPredicted RBP8.11□□□□□ -1.11
SYN3-208ENST00000467095 PIBF1Q8WXW3 757 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 PHKBQ93100 1093 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 COA7Q96BR5 231 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 AIFM3Q96NN9 605 aa8.11□□□□□ -1.11
SYN3-208ENST00000467095 DDX49Q9Y6V7 483 aaKnown RBP8.11□□□□□ -1.11
SYN3-208ENST00000467095 TRIP12Q14669 1992 aaPredicted RBP8.1□□□□□ -1.11
SYN3-208ENST00000467095 DNAJC25-GNG10A0A024R161 153 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 NFIBO00712 420 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 EIF5BO60841 1220 aaKnown RBP8.1□□□□□ -1.11
SYN3-208ENST00000467095 COBLO75128 1261 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 ICAM1P05362 532 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 CALM1P0DP23 149 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 CALM2P0DP24 149 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 CALM3P0DP25 149 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 STAT3P40763 770 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 PSMC4P43686 418 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 CTCFP49711 727 aaPredicted RBP8.1□□□□□ -1.11
SYN3-208ENST00000467095 METAP2P50579 478 aaKnown RBP eCLIP8.1□□□□□ -1.11
SYN3-208ENST00000467095 OAZ1P54368 228 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 PLS1Q14651 629 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 RABEP1Q15276 862 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 GPR142Q7Z601 462 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 MB21D1Q8N884 522 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 SHCBP1Q8NEM2 672 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 ANKK1Q8NFD2 765 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 GTF3C6Q969F1 213 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 GJB4Q9NTQ9 266 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 FLRT1Q9NZU1 646 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 COL20A1Q9P218 1284 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 KIAA1468Q9P260 1216 aa8.1□□□□□ -1.11
SYN3-208ENST00000467095 MYH9P35579 1960 aaKnown RBP8.1□□□□□ -1.11
SYN3-208ENST00000467095 LOXHD1Q8IVV2 1947 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 ZBTB5O15062 677 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 EDIL3O43854 480 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 JAK2O60674 1132 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 ZBED4O75132 1171 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 FDX1P10109 184 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 ALAS1P13196 640 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 IFNAR1P17181 557 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 PRKCZQ05513 592 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 TRIM32Q13049 653 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 IKQ13123 557 aaPredicted RBP8.09□□□□□ -1.11
SYN3-208ENST00000467095 CAMK2BQ13554 666 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 GRB14Q14449 540 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 NPY5RQ15761 445 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 CCL14Q16627 93 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 USH1GQ495M9 461 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 WWC2Q6AWC2 1192 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 HOMER1Q86YM7 354 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 NSUN7Q8NE18 718 aaKnown RBP8.09□□□□□ -1.11
SYN3-208ENST00000467095 CTCFLQ8NI51 663 aaPredicted RBP8.09□□□□□ -1.11
SYN3-208ENST00000467095 GTF3C2Q8WUA4 911 aaPredicted RBP8.09□□□□□ -1.11
SYN3-208ENST00000467095 GPKOWQ92917 476 aaPredicted RBP eCLIP8.09□□□□□ -1.11
SYN3-208ENST00000467095 TRERF1Q96PN7 1200 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 TEX13BQ9BXU2 312 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 A1CFQ9NQ94 594 aaKnown RBP8.09□□□□□ -1.11
SYN3-208ENST00000467095 PRDM10Q9NQV6 1147 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 RBM28Q9NW13 759 aaKnown RBP8.09□□□□□ -1.11
SYN3-208ENST00000467095 ISY1Q9ULR0 285 aaKnown RBP8.09□□□□□ -1.11
SYN3-208ENST00000467095 LIMCH1Q9UPQ0 1083 aa8.09□□□□□ -1.11
SYN3-208ENST00000467095 V9GY48 417 aaPredicted RBP8.09□□□□□ -1.11
SYN3-208ENST00000467095 TNRC18O15417 2968 aaPredicted RBP8.08□□□□□ -1.12
SYN3-208ENST00000467095 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
SYN3-208ENST00000467095 SOWAHBA6NEL2 793 aa8.08□□□□□ -1.12
SYN3-208ENST00000467095 STXBP3O00186 592 aa8.08□□□□□ -1.12
SYN3-208ENST00000467095 PRPF3O43395 683 aaKnown RBP8.08□□□□□ -1.12
SYN3-208ENST00000467095 FMNL1O95466 1100 aaPredicted RBP8.08□□□□□ -1.12
SYN3-208ENST00000467095 PGK2P07205 417 aa8.08□□□□□ -1.12
SYN3-208ENST00000467095 SLC4A3P48751 1232 aa8.08□□□□□ -1.12
SYN3-208ENST00000467095 FLT3LGP49771 235 aa8.08□□□□□ -1.12
SYN3-208ENST00000467095 FGD1P98174 961 aa8.08□□□□□ -1.12
SYN3-208ENST00000467095 CNTN2Q02246 1040 aa8.08□□□□□ -1.12
SYN3-208ENST00000467095 GHRHRQ02643 423 aa8.08□□□□□ -1.12
SYN3-208ENST00000467095 ZNF792Q3KQV3 632 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms