RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 MYH13Q9UKX3 1938 aa20.08■□□□□ 0.8
SNAPC3-205ENST00000467062 A0A0U1RQJ8 604 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 SEMA3EO15041 775 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 LDHBP07195 334 aaKnown RBP20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 TBC1D8BQ0IIM8 1120 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 SNCBQ16143 134 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 TMED8Q6PL24 325 aaPredicted RBP20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 PNMA1Q8ND90 353 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 ATRIPQ8WXE1 791 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 WNK3Q9BYP7 1800 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 PP2D1A8MPX8 630 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 CUL4BQ13620 913 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 NR1I3Q14994 352 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 KANK3Q6NY19 840 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 ARPP21Q9UBL0 812 aaPredicted RBP20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 DACH1Q9UI36 760 aa20.07■□□□□ 0.8
SNAPC3-205ENST00000467062 ANKRD33BA6NCL7 494 aa20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 ATP2B2Q01814 1243 aa20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 PFKFB3Q16875 520 aaPredicted RBP20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 SLC35G1Q2M3R5 365 aa20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 ELOA2Q8IYF1 753 aaPredicted RBP20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 CENPHQ9H3R5 247 aa20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 ATP2C1P98194 919 aaPredicted RBP20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 DRP2Q13474 957 aa20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 C12orf60Q5U649 245 aa20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 AP1ARQ63HQ0 302 aa20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 CEP57Q86XR8 500 aa20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 SH3GL3Q99963 347 aa20.06■□□□□ 0.8
SNAPC3-205ENST00000467062 XDHP47989 1333 aa20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 ZEB2O60315 1214 aa20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 CCNI2Q6ZMN8 369 aaPredicted RBP20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 FAM196AQ6ZSG2 479 aa20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 SH3RF1Q7Z6J0 888 aa20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 SPATS2LQ9NUQ6 558 aaKnown RBP20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 NRAPQ86VF7 1730 aa20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 CCT6AP40227 531 aaKnown RBP20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 INHBEP58166 350 aa20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 FAM43BQ6ZT52 329 aaPredicted RBP20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 FERMT2Q96AC1 680 aa20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 DDX20Q9UHI6 824 aaKnown RBP20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 CTNND2Q9UQB3 1225 aa20.05■□□□□ 0.8
SNAPC3-205ENST00000467062 GOLGA6L7A0A1B0GV03 622 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 PPP1R3GB7ZBB8 358 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 ICA1Q05084 483 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 ADCY2Q08462 1091 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 RNF187Q5TA31 235 aaPredicted RBP20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 CCDC51Q96ER9 411 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 GDAP1L1Q96MZ0 367 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 GGA2Q9UJY4 613 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 CYTH3O43739 400 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 TSPY3P0CV98 308 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 TSPY8P0CW00 308 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 CKAP4Q07065 602 aaKnown RBP20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 APTXQ7Z2E3 356 aaKnown RBP20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 HEATR3Q7Z4Q2 680 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 TRIML1Q8N9V2 468 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 ZNF483Q8TF39 744 aaPredicted RBP20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 EEF2KMTQ96G04 330 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 CALR3Q96L12 384 aaKnown RBP20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 ATP6V0A4Q9HBG4 840 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 SLC40A1Q9NP59 571 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 SYNRGQ9UMZ2 1314 aa20.04■□□□□ 0.8
SNAPC3-205ENST00000467062 PCP11498 1178 aaKnown RBP20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 CCNHP51946 323 aaPredicted RBP20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 NAP1L1P55209 391 aaKnown RBP20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 SLC8A3P57103 927 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 RBL2Q08999 1139 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 SBK1Q52WX2 424 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 CCDC13Q8IYE1 715 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 FAM184BQ9ULE4 1060 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 A0A1B0GTH6 734 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 ECM2O94769 699 aaPredicted RBP20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 EPB41P11171 864 aaKnown RBP20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 VPS72Q15906 364 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 TRAPPC3LQ5T215 181 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 RC3H1Q5TC82 1133 aaKnown RBP20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 RRAGBQ5VZM2 374 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 TRAPPC11Q7Z392 1133 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 IRS2Q9Y4H2 1338 aa20.03■□□□□ 0.8
SNAPC3-205ENST00000467062 RREB1Q92766 1687 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 SLC8A1P32418 973 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 INF2Q27J81 1249 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 TMTC1Q8IUR5 882 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 CNGA4Q8IV77 575 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 PARP9Q8IXQ6 854 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 BLIDQ8IZY5 108 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 TMEM60Q9H2L4 133 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 VAT1LQ9HCJ6 419 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 MAD2L2Q9UI95 211 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 ERCC5P28715 1186 aaPredicted RBP20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 NBPF9Q3BBW0 867 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 SPATA1Q5VX52 437 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 CCDC70Q6NSX1 233 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 ACTR5Q9H9F9 607 aaPredicted RBP20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 GDAQ9Y2T3 454 aa20.02■□□□□ 0.8
SNAPC3-205ENST00000467062 MFAP3LO75121 409 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 KIF5BP33176 963 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 SEMA3FQ13275 785 aa20.01■□□□□ 0.79
SNAPC3-205ENST00000467062 NAA25Q14CX7 972 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms