RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FBXO11Q86XK2 927 aa15.39■□□□□ 0.05
UBR4-210ENST00000466969 INCENPQ9NQS7 918 aa15.39■□□□□ 0.05
UBR4-210ENST00000466969 PPP1R9AQ9ULJ8 1098 aa15.39■□□□□ 0.05
UBR4-210ENST00000466969 AKAP2Q9Y2D5 859 aa15.39■□□□□ 0.05
UBR4-210ENST00000466969 MYL3P08590 195 aa15.38■□□□□ 0.05
UBR4-210ENST00000466969 SDHBP21912 280 aa15.38■□□□□ 0.05
UBR4-210ENST00000466969 PTGS1P23219 599 aa15.38■□□□□ 0.05
UBR4-210ENST00000466969 RRP1P56182 461 aaKnown RBP15.38■□□□□ 0.05
UBR4-210ENST00000466969 ASTLQ6HA08 431 aaPredicted RBP15.38■□□□□ 0.05
UBR4-210ENST00000466969 ADGRA1Q86SQ6 560 aa15.38■□□□□ 0.05
UBR4-210ENST00000466969 REPS2Q8NFH8 660 aa15.38■□□□□ 0.05
UBR4-210ENST00000466969 CAGE1Q8TC20 777 aa15.38■□□□□ 0.05
UBR4-210ENST00000466969 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
UBR4-210ENST00000466969 FGD4Q96M96 766 aa15.38■□□□□ 0.05
UBR4-210ENST00000466969 HAUS7Q99871 368 aa15.38■□□□□ 0.05
UBR4-210ENST00000466969 TMX2Q9Y320 296 aa15.38■□□□□ 0.05
UBR4-210ENST00000466969 LINC01565O15544 149 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 AMHP03971 560 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 SELPP16109 830 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 DYNLL1P63167 89 aaKnown RBP15.37■□□□□ 0.05
UBR4-210ENST00000466969 HTRA4P83105 476 aaPredicted RBP15.37■□□□□ 0.05
UBR4-210ENST00000466969 ADAM15Q13444 863 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 IQSEC1Q6DN90 963 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 NFRKBQ6P4R8 1299 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 TMEM179Q6ZVK1 233 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 MYOCDQ8IZQ8 938 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 SMRP1Q8NCR6 262 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 MSLNLQ96KJ4 702 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 NEUROD6Q96NK8 337 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 MTG1Q9BT17 334 aaPredicted RBP15.37■□□□□ 0.05
UBR4-210ENST00000466969 LMAN2LQ9H0V9 348 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 MFSD1Q9H3U5 465 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 RIPK3Q9Y572 518 aa15.37■□□□□ 0.05
UBR4-210ENST00000466969 TRIP12Q14669 1992 aaPredicted RBP15.36■□□□□ 0.05
UBR4-210ENST00000466969 SETXQ7Z333 2677 aaKnown RBP15.36■□□□□ 0.05
UBR4-210ENST00000466969 CXCL10P02778 98 aa15.36■□□□□ 0.05
UBR4-210ENST00000466969 GTF2F1P35269 517 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBR4-210ENST00000466969 PURAQ00577 322 aaKnown RBP15.36■□□□□ 0.05
UBR4-210ENST00000466969 PTPN11Q06124 597 aaPredicted RBP15.36■□□□□ 0.05
UBR4-210ENST00000466969 LRRC8DQ7L1W4 858 aa15.36■□□□□ 0.05
UBR4-210ENST00000466969 PPP2R3CQ969Q6 453 aa15.36■□□□□ 0.05
UBR4-210ENST00000466969 YME1L1Q96TA2 773 aa15.36■□□□□ 0.05
UBR4-210ENST00000466969 USP15Q9Y4E8 981 aaPredicted RBP15.36■□□□□ 0.05
UBR4-210ENST00000466969 CTDP1Q9Y5B0 961 aaPredicted RBP15.36■□□□□ 0.05
UBR4-210ENST00000466969 FRYLO94915 3013 aa15.36■□□□□ 0.05
UBR4-210ENST00000466969 ASB14A6NK59 587 aa15.35■□□□□ 0.05
UBR4-210ENST00000466969 CPT1AP50416 773 aa15.35■□□□□ 0.05
UBR4-210ENST00000466969 ICA1Q05084 483 aa15.35■□□□□ 0.05
UBR4-210ENST00000466969 GPNMBQ14956 572 aa15.35■□□□□ 0.05
UBR4-210ENST00000466969 FBXO40Q9UH90 709 aa15.35■□□□□ 0.05
UBR4-210ENST00000466969 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
UBR4-210ENST00000466969 RAD21O60216 631 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 POLR3DP05423 398 aaPredicted RBP15.34■□□□□ 0.05
UBR4-210ENST00000466969 ARID4AP29374 1257 aaPredicted RBP15.34■□□□□ 0.05
UBR4-210ENST00000466969 PLCD1P51178 756 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 CLCN5P51795 746 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 DMWDQ09019 674 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 COASYQ13057 564 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 ANGPT1Q15389 498 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 PTGISQ16647 500 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.34■□□□□ 0.056e-8■■■■□ 24.3
UBR4-210ENST00000466969 CERS3Q8IU89 383 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 UBALD2Q8IYN6 164 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 CPXCR1Q8N123 301 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 CYP2W1Q8TAV3 490 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 PPP1R13LQ8WUF5 828 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 RUBCNQ92622 972 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 USP44Q9H0E7 712 aa15.34■□□□□ 0.05
UBR4-210ENST00000466969 PA2G4Q9UQ80 394 aaKnown RBP15.34■□□□□ 0.05
UBR4-210ENST00000466969 NBNO60934 754 aa15.33■□□□□ 0.04
UBR4-210ENST00000466969 EXOSC9Q06265 439 aaKnown RBP15.33■□□□□ 0.04
UBR4-210ENST00000466969 MTMR3Q13615 1198 aa15.33■□□□□ 0.04
UBR4-210ENST00000466969 TCTN1Q2MV58 587 aa15.33■□□□□ 0.04
UBR4-210ENST00000466969 BRDTQ58F21 947 aaPredicted RBP15.33■□□□□ 0.04
UBR4-210ENST00000466969 C11orf84Q9BUA3 381 aaPredicted RBP15.33■□□□□ 0.04
UBR4-210ENST00000466969 PDGFCQ9NRA1 345 aa15.33■□□□□ 0.04
UBR4-210ENST00000466969 IL16Q14005 1332 aa15.33■□□□□ 0.04
UBR4-210ENST00000466969 CSPG5O95196 566 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 RB1P06400 928 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 ADRB1P08588 477 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 CTNNB1P35222 781 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 ATXN1P54253 815 aaKnown RBP15.32■□□□□ 0.04
UBR4-210ENST00000466969 CNTN2Q02246 1040 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 KIAA1211Q6ZU35 1233 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.32■□□□□ 0.04
UBR4-210ENST00000466969 EEPD1Q7L9B9 569 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 CLEC10AQ8IUN9 316 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 WWC1Q8IX03 1113 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 KREMEN2Q8NCW0 462 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 CLEC1BQ9P126 229 aa15.32■□□□□ 0.04
UBR4-210ENST00000466969 NLRC5Q86WI3 1866 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 MICAL3Q7RTP6 2002 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 USP17L12C9JPN9 530 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 USP17L21D6R901 530 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 GRM6O15303 877 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 UQCRFS1P1P0C7P4 283 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 ATF7P17544 494 aaPredicted RBP15.31■□□□□ 0.04
UBR4-210ENST00000466969 FAM83BQ5T0W9 1011 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 SIAH1Q8IUQ4 282 aa15.31■□□□□ 0.04
UBR4-210ENST00000466969 FBXO16Q8IX29 292 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms