RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 TIMM44O43615 452 aa6.92□□□□□ -1.3
LRCH3-212ENST00000466845 SIGLEC6O43699 453 aa6.92□□□□□ -1.3
LRCH3-212ENST00000466845 PEX19P40855 299 aa6.92□□□□□ -1.3
LRCH3-212ENST00000466845 KIR2DL1P43626 348 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-212ENST00000466845 KIR2DL2P43627 348 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-212ENST00000466845 DHX8Q14562 1220 aaKnown RBP6.92□□□□□ -1.3
LRCH3-212ENST00000466845 IRF2BP1Q8IU81 584 aa6.92□□□□□ -1.3
LRCH3-212ENST00000466845 USHBP1Q8N6Y0 703 aa6.92□□□□□ -1.3
LRCH3-212ENST00000466845 LINC01599Q8WXQ3 324 aa6.92□□□□□ -1.3
LRCH3-212ENST00000466845 NEUROD6Q96NK8 337 aa6.92□□□□□ -1.3
LRCH3-212ENST00000466845 SLC26A8Q96RN1 970 aa6.92□□□□□ -1.3
LRCH3-212ENST00000466845 CDC5LQ99459 802 aaKnown RBP6.92□□□□□ -1.3
LRCH3-212ENST00000466845 CWC25Q9NXE8 425 aaPredicted RBP6.92□□□□□ -1.3
LRCH3-212ENST00000466845 DDX41Q9UJV9 622 aaKnown RBP6.92□□□□□ -1.3
LRCH3-212ENST00000466845 SHISA3A0PJX4 238 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 TSPAN15O95858 294 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 FGAP02671 866 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 S100BP04271 92 aaPredicted RBP6.91□□□□□ -1.3
LRCH3-212ENST00000466845 FAM163BP0C2L3 166 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 RAP1GAPP47736 663 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 JAG1P78504 1218 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 UBE4AQ14139 1066 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 BMS1Q14692 1282 aaKnown RBP6.91□□□□□ -1.3
LRCH3-212ENST00000466845 DRC7Q8IY82 874 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 SVIPQ8NHG7 77 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 BORCS6Q96GS4 357 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 TCTN2Q96GX1 697 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 NAP1L4Q99733 375 aaKnown RBP6.91□□□□□ -1.3
LRCH3-212ENST00000466845 EPB41L4BQ9H329 900 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 YY1AP1Q9H869 796 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 DDX56Q9NY93 547 aaKnown RBP6.91□□□□□ -1.3
LRCH3-212ENST00000466845 TCEAL9Q9UHQ7 104 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 PCDHB12Q9Y5F1 795 aa6.91□□□□□ -1.3
LRCH3-212ENST00000466845 IGHDP01880 384 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 TGFB3P10600 412 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 MAP9Q49MG5 647 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 ANKRD39Q53RE8 183 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 GJC2Q5T442 439 aaPredicted RBP6.9□□□□□ -1.3
LRCH3-212ENST00000466845 TAF3Q5VWG9 929 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 CCDC174Q6PII3 467 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 PRR23BQ6ZRT6 265 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 JAZF1Q86VZ6 243 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 SLC39A13Q96H72 371 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 FERD3LQ96RJ6 166 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 LRRC27Q9C0I9 530 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 NSUN3Q9H649 340 aaKnown RBP6.9□□□□□ -1.3
LRCH3-212ENST00000466845 SP110Q9HB58 689 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 DCP1AQ9NPI6 582 aaPredicted RBP6.9□□□□□ -1.3
LRCH3-212ENST00000466845 GEMIN8Q9NWZ8 242 aaKnown RBP6.9□□□□□ -1.3
LRCH3-212ENST00000466845 SUCOQ9UBS9 1254 aaKnown RBP6.9□□□□□ -1.3
LRCH3-212ENST00000466845 SMC3Q9UQE7 1217 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 MRVI1Q9Y6F6 885 aa6.9□□□□□ -1.3
LRCH3-212ENST00000466845 TDRD9Q8NDG6 1382 aaKnown RBP6.9□□□□□ -1.31
LRCH3-212ENST00000466845 SNAPC4Q5SXM2 1469 aa6.9□□□□□ -1.31
LRCH3-212ENST00000466845 RIMBP3CA6NJZ7 1639 aa6.9□□□□□ -1.31
LRCH3-212ENST00000466845 RIMBP3BA6NNM3 1639 aa6.9□□□□□ -1.31
LRCH3-212ENST00000466845 RIMBP3Q9UFD9 1639 aa6.9□□□□□ -1.31
LRCH3-212ENST00000466845 NFIBO00712 420 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 TMEM253P0C7T8 217 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 FLT3P36888 993 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 TERF1P54274 439 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 POU5F1BQ06416 359 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 BBS9Q3SYG4 887 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 SYDE1Q6ZW31 735 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-212ENST00000466845 ZSCAN30Q86W11 494 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 SLC6A18Q96N87 628 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 TOX2Q96NM4 488 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 SLC9A7Q96T83 725 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 PRDM14Q9GZV8 571 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 MKRN2Q9H000 416 aaKnown RBP6.89□□□□□ -1.31
LRCH3-212ENST00000466845 CASS4Q9NQ75 786 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 CHST7Q9NS84 486 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 TNFRSF10DQ9UBN6 386 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 ZMYM5Q9UJ78 669 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 TCFL5Q9UL49 500 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 YBX2Q9Y2T7 364 aaKnown RBP6.89□□□□□ -1.31
LRCH3-212ENST00000466845 SLC12A7Q9Y666 1083 aa6.89□□□□□ -1.31
LRCH3-212ENST00000466845 PBRM1Q86U86 1689 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 ARHGEF11O15085 1522 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 GRIN2BQ13224 1484 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 MAGI1Q96QZ7 1491 aaPredicted RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 IPO8O15397 1037 aaKnown RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 PEX10O60683 326 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 LDHCP07864 332 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 COL6A1P12109 1028 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 RPL10P27635 214 aaKnown RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 POLR2BP30876 1174 aaKnown RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 ERVFC1P60507 584 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 PSMC1P62191 440 aaKnown RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 SATB1Q01826 763 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 AUHQ13825 339 aaKnown RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 KCTD2Q14681 263 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 MAPRE1Q15691 268 aaKnown RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 CDC37Q16543 378 aaPredicted RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 C1QTNF12Q5T7M4 302 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 RNF187Q5TA31 235 aaPredicted RBP6.88□□□□□ -1.31
LRCH3-212ENST00000466845 ANKLE2Q86XL3 938 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 TMEM192Q8IY95 271 aa6.88□□□□□ -1.31
LRCH3-212ENST00000466845 NGEFQ8N5V2 710 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms