RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 REPS2Q8NFH8 660 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 DDX11Q96FC9 970 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 ZNF274Q96GC6 653 aaPredicted RBP11.45□□□□□ -0.58
PMF1-204ENST00000466489 ZNF396Q96N95 335 aaPredicted RBP11.45□□□□□ -0.58
PMF1-204ENST00000466489 MMP19Q99542 508 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 AMNQ9BXJ7 453 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 UBA5Q9GZZ9 404 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 PORCNQ9H237 461 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 ACAD9Q9H845 621 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 HOMER2Q9NSB8 354 aa11.45□□□□□ -0.58
PMF1-204ENST00000466489 PFASO15067 1338 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 ABCB11O95342 1321 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 KIF2AO00139 706 aaPredicted RBP11.44□□□□□ -0.58
PMF1-204ENST00000466489 CDKL5O76039 1030 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 PTPREP23469 700 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 GJB2P29033 226 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 PKP1Q13835 747 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 DNTTIP2Q5QJE6 756 aaKnown RBP11.44□□□□□ -0.58
PMF1-204ENST00000466489 COL13A1Q5TAT6 717 aaPredicted RBP11.44□□□□□ -0.58
PMF1-204ENST00000466489 NBPF11Q86T75 865 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 FBXO11Q86XK2 927 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 HOMER1Q86YM7 354 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 TRIM22Q8IYM9 498 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 ANKRD35Q8N283 1001 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 FAM200AQ8TCP9 573 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 TRERF1Q96PN7 1200 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 MPHOSPH6Q99547 160 aaKnown RBP11.44□□□□□ -0.58
PMF1-204ENST00000466489 ARHGAP39Q9C0H5 1083 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 MAF1Q9H063 256 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 RIOX1Q9H6W3 641 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 RNF146Q9NTX7 359 aa11.44□□□□□ -0.58
PMF1-204ENST00000466489 MRPL11Q9Y3B7 192 aaKnown RBP11.44□□□□□ -0.58
PMF1-204ENST00000466489 NID2Q14112 1375 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 PNMA6FA0A0J9YX94 578 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 FLT3LGP49771 235 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 EVCP57679 992 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 TPM4P67936 248 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 PRKCZQ05513 592 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 IRF5Q13568 498 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 GRB14Q14449 540 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 ZRSR1Q15695 479 aaKnown RBP11.43□□□□□ -0.58
PMF1-204ENST00000466489 QRICH1Q2TAL8 776 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 USH1GQ495M9 461 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 SLC9C1Q4G0N8 1177 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 TMTC3Q6ZXV5 915 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 MCF2L2Q86YR7 1114 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 RAB11FIP4Q86YS3 637 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 SLAIN1Q8ND83 568 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 AGBL1Q96MI9 1066 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 APBA2Q99767 749 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 NUP62CLQ9H1M0 184 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 CPVLQ9H3G5 476 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 JMJD4Q9H9V9 463 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 SPTLC3Q9NUV7 552 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 PTPN22Q9Y2R2 807 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 PAXBP1Q9Y5B6 917 aa11.43□□□□□ -0.58
PMF1-204ENST00000466489 ZNF536O15090 1300 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 B4DLN1 442 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 H3BQV1 296 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 hCG_1984214I3L0E3 225 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 PEX10O60683 326 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 XRCC5P13010 732 aaKnown RBP11.42□□□□□ -0.58
PMF1-204ENST00000466489 ADORA2AP29274 412 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 PDIA3P30101 505 aaKnown RBP11.42□□□□□ -0.58
PMF1-204ENST00000466489 GTF2F1P35269 517 aaKnown RBP eCLIP11.42□□□□□ -0.58
PMF1-204ENST00000466489 MRPL12P52815 198 aaKnown RBP11.42□□□□□ -0.58
PMF1-204ENST00000466489 SNAP25P60880 206 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 COL9A3Q14050 684 aaPredicted RBP11.42□□□□□ -0.58
PMF1-204ENST00000466489 TOB2Q14106 344 aaPredicted RBP11.42□□□□□ -0.58
PMF1-204ENST00000466489 ZNF713Q8N859 430 aaPredicted RBP11.42□□□□□ -0.58
PMF1-204ENST00000466489 PIGSQ96S52 555 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 TNMDQ9H2S6 317 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 BIN2Q9UBW5 565 aaPredicted RBP11.42□□□□□ -0.58
PMF1-204ENST00000466489 MTMR6Q9Y217 621 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 PCDHA1Q9Y5I3 950 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 SMCHD1A6NHR9 2005 aa11.42□□□□□ -0.58
PMF1-204ENST00000466489 PTPDC1A2A3K4 754 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 ADCY3O60266 1144 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 CAPN15O75808 1086 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 PLEKHA8P1O95397 391 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 CYP2B6P20813 491 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 CTGFP29279 349 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 UBXN2AP68543 259 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 NOLC1Q14978 699 aaKnown RBP eCLIP11.41□□□□□ -0.58
PMF1-204ENST00000466489 SYCP1Q15431 976 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 MORN1Q5T089 497 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 POTEEQ6S8J3 1075 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 NSMFQ6X4W1 530 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 NOL8Q76FK4 1167 aaKnown RBP11.41□□□□□ -0.58
PMF1-204ENST00000466489 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
PMF1-204ENST00000466489 CCDC82Q8N4S0 544 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 PXYLP1Q8TE99 480 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 CCDC12Q8WUD4 166 aaPredicted RBP11.41□□□□□ -0.58
PMF1-204ENST00000466489 CUL5Q93034 780 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 MTMR8Q96EF0 704 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 SPATA32Q96LK8 384 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 MCOLN1Q9GZU1 580 aa11.41□□□□□ -0.58
PMF1-204ENST00000466489 ADD3Q9UEY8 706 aaKnown RBP11.41□□□□□ -0.58
PMF1-204ENST00000466489 PTCH2Q9Y6C5 1203 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms