RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 KBTBD3Q8NAB2 608 aa13.23□□□□□ -0.29
CSMD2-207ENST00000465819 STAG1Q8WVM7 1258 aa13.23□□□□□ -0.29
CSMD2-207ENST00000465819 ARNTL2Q8WYA1 636 aa13.23□□□□□ -0.29
CSMD2-207ENST00000465819 VTA1Q9NP79 307 aa13.23□□□□□ -0.29
CSMD2-207ENST00000465819 POLR3EQ9NVU0 708 aa13.23□□□□□ -0.29
CSMD2-207ENST00000465819 CYP39A1Q9NYL5 469 aa13.23□□□□□ -0.29
CSMD2-207ENST00000465819 COL4A4P53420 1690 aaPredicted RBP13.23□□□□□ -0.29
CSMD2-207ENST00000465819 REV3LO60673 3130 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 GPAA1O43292 621 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 TLL1O43897 1013 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 PLA2G6O60733 806 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 GNAT2P19087 354 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 RFC2P35250 354 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 SLC1A4P43007 532 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 TAP1Q03518 808 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 DUSP28Q4G0W2 176 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 MUM1L1Q5H9M0 696 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 PHOSPHO2Q8TCD6 241 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 PI4K2BQ8TCG2 481 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 MORC4Q8TE76 937 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 HLA-CQ95604 372 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 GMCL1Q96IK5 515 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 CRBNQ96SW2 442 aa13.22□□□□□ -0.29
CSMD2-207ENST00000465819 SEC62Q99442 399 aaKnown RBP13.22□□□□□ -0.29
CSMD2-207ENST00000465819 SCN10AQ9Y5Y9 1956 aa13.21□□□□□ -0.29
CSMD2-207ENST00000465819 XIRP2A4UGR9 3374 aa13.21□□□□□ -0.29
CSMD2-207ENST00000465819 ARHGEF15O94989 841 aa13.21□□□□□ -0.29
CSMD2-207ENST00000465819 APPP05067 770 aa13.21□□□□□ -0.29
CSMD2-207ENST00000465819 MYL3P08590 195 aa13.21□□□□□ -0.29
CSMD2-207ENST00000465819 SNAP25P60880 206 aa13.21□□□□□ -0.29
CSMD2-207ENST00000465819 PURAQ00577 322 aaKnown RBP13.21□□□□□ -0.29
CSMD2-207ENST00000465819 NSMFQ6X4W1 530 aa13.21□□□□□ -0.29
CSMD2-207ENST00000465819 KCTD1Q719H9 257 aa13.21□□□□□ -0.29
CSMD2-207ENST00000465819 CHMP4CQ96CF2 233 aa13.21□□□□□ -0.29
CSMD2-207ENST00000465819 PURBQ96QR8 312 aaKnown RBP13.21□□□□□ -0.29
CSMD2-207ENST00000465819 PTPRSQ13332 1948 aa13.21□□□□□ -0.3
CSMD2-207ENST00000465819 KIF28PB7ZC32 967 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 FOXP2O15409 715 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 RNF113AO15541 343 aaKnown RBP13.2□□□□□ -0.3
CSMD2-207ENST00000465819 IQCF3P0C7M6 154 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 MCCP23508 829 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 CPT1AP50416 773 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 TFAP4Q01664 338 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 PDE4BQ07343 736 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 GRB10Q13322 594 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 FAM47CQ5HY64 1035 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 HERC6Q8IVU3 1022 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 IFNL3Q8IZI9 196 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 MTG1Q9BT17 334 aaPredicted RBP13.2□□□□□ -0.3
CSMD2-207ENST00000465819 WDR11Q9BZH6 1224 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
CSMD2-207ENST00000465819 ADD3Q9UEY8 706 aaKnown RBP13.2□□□□□ -0.3
CSMD2-207ENST00000465819 CCPG1Q9ULG6 757 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 PRR12Q9ULL5 1215 aa13.2□□□□□ -0.3
CSMD2-207ENST00000465819 TET1Q8NFU7 2136 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 SALL3Q9BXA9 1300 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 PATL2C9JE40 543 aaKnown RBP13.19□□□□□ -0.3
CSMD2-207ENST00000465819 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 GPR37L1O60883 481 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 ZFYP08048 801 aaPredicted RBP13.19□□□□□ -0.3
CSMD2-207ENST00000465819 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
CSMD2-207ENST00000465819 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
CSMD2-207ENST00000465819 AAMPQ13685 434 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 RCSD1Q6JBY9 416 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 RETREG2Q8NC44 543 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 FTOQ9C0B1 505 aaKnown RBP eCLIP13.19□□□□□ -0.3
CSMD2-207ENST00000465819 C11orf16Q9NQ32 467 aa13.19□□□□□ -0.3
CSMD2-207ENST00000465819 TRIP12Q14669 1992 aaPredicted RBP13.18□□□□□ -0.3
CSMD2-207ENST00000465819 RBM47A0AV96 593 aaKnown RBP13.18□□□□□ -0.3
CSMD2-207ENST00000465819 FAM86C2PA6NEL3 165 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 LPXNO60711 386 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 BAIAP3O94812 1187 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 ICAM1P05362 532 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 PPARAQ07869 468 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 NBPF20Q3BBV1 942 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
CSMD2-207ENST00000465819 NFRKBQ6P4R8 1299 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 RASGRP2Q7LDG7 609 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 PPP1R13LQ8WUF5 828 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 KHSRPQ92945 711 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSMD2-207ENST00000465819 NACAP1Q9BZK3 213 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 STX8Q9UNK0 236 aa13.18□□□□□ -0.3
CSMD2-207ENST00000465819 RAD50Q92878 1312 aa13.17□□□□□ -0.3
CSMD2-207ENST00000465819 LOC102724159A0A0B4J2E5 919 aa13.17□□□□□ -0.3
CSMD2-207ENST00000465819 PTPN11Q06124 597 aaPredicted RBP13.17□□□□□ -0.3
CSMD2-207ENST00000465819 BFSP2Q13515 415 aa13.17□□□□□ -0.3
CSMD2-207ENST00000465819 BAATQ14032 418 aaPredicted RBP13.17□□□□□ -0.3
CSMD2-207ENST00000465819 PWP2Q15269 919 aaKnown RBP13.17□□□□□ -0.3
CSMD2-207ENST00000465819 SPRED2Q7Z698 418 aa13.17□□□□□ -0.3
CSMD2-207ENST00000465819 NAPBQ9H115 298 aa13.17□□□□□ -0.3
CSMD2-207ENST00000465819 RANBP17Q9H2T7 1088 aaKnown RBP13.17□□□□□ -0.3
CSMD2-207ENST00000465819 INCENPQ9NQS7 918 aa13.17□□□□□ -0.3
CSMD2-207ENST00000465819 TRANK1O15050 2925 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 PTPDC1A2A3K4 754 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 PI4K2BG5E9Z4 385 aa13.16□□□□□ -0.3
CSMD2-207ENST00000465819 NFIBO00712 420 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms