RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 USP17L21D6R901 530 aa18.12■□□□□ 0.49
NCSTN-210ENST00000465223 BCAR3O75815 825 aa18.12■□□□□ 0.49
NCSTN-210ENST00000465223 BFSP2Q13515 415 aa18.12■□□□□ 0.49
NCSTN-210ENST00000465223 TCEAL5Q5H9L2 206 aa18.12■□□□□ 0.49
NCSTN-210ENST00000465223 PABPC5Q96DU9 382 aaKnown RBP18.12■□□□□ 0.49
NCSTN-210ENST00000465223 MRPL38Q96DV4 380 aaKnown RBP18.12■□□□□ 0.49
NCSTN-210ENST00000465223 CRBNQ96SW2 442 aa18.12■□□□□ 0.49
NCSTN-210ENST00000465223 MTG1Q9BT17 334 aaPredicted RBP18.12■□□□□ 0.49
NCSTN-210ENST00000465223 ACAD9Q9H845 621 aa18.12■□□□□ 0.49
NCSTN-210ENST00000465223 FAM50BQ9Y247 325 aa18.12■□□□□ 0.49
NCSTN-210ENST00000465223 COG6Q9Y2V7 657 aa18.12■□□□□ 0.49
NCSTN-210ENST00000465223 OAZ1P54368 228 aa18.11■□□□□ 0.49
NCSTN-210ENST00000465223 BMP8AQ7Z5Y6 402 aa18.11■□□□□ 0.49
NCSTN-210ENST00000465223 RNF135Q8IUD6 432 aa18.11■□□□□ 0.49
NCSTN-210ENST00000465223 EDAQ92838 391 aa18.11■□□□□ 0.49
NCSTN-210ENST00000465223 PBXIP1Q96AQ6 731 aa18.11■□□□□ 0.49
NCSTN-210ENST00000465223 PURBQ96QR8 312 aaKnown RBP18.11■□□□□ 0.49
NCSTN-210ENST00000465223 RNF146Q9NTX7 359 aa18.11■□□□□ 0.49
NCSTN-210ENST00000465223 PLXNA3P51805 1871 aa18.11■□□□□ 0.49
NCSTN-210ENST00000465223 CLUL1Q15846 466 aa18.1■□□□□ 0.49
NCSTN-210ENST00000465223 DUSP28Q4G0W2 176 aa18.1■□□□□ 0.49
NCSTN-210ENST00000465223 BANK1Q8NDB2 785 aa18.1■□□□□ 0.49
NCSTN-210ENST00000465223 SSH3Q8TE77 659 aa18.1■□□□□ 0.49
NCSTN-210ENST00000465223 ALG13Q9NP73 1137 aaKnown RBP18.1■□□□□ 0.49
NCSTN-210ENST00000465223 GPHNQ9NQX3 736 aaPredicted RBP18.1■□□□□ 0.49
NCSTN-210ENST00000465223 CLDND1Q9NY35 253 aa18.1■□□□□ 0.49
NCSTN-210ENST00000465223 NOD1Q9Y239 953 aa18.1■□□□□ 0.49
NCSTN-210ENST00000465223 TMEM221A6NGB7 291 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 M0R296 226 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 MBD4O95243 580 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 LRRFIP1Q32MZ4 808 aaKnown RBP18.09■□□□□ 0.49
NCSTN-210ENST00000465223 NFRKBQ6P4R8 1299 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 CNKSR3Q6P9H4 555 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 STK11IPQ8N1F8 1099 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 PRRX2Q99811 253 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 VTA1Q9NP79 307 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 ATP8A2Q9NTI2 1148 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 NYAP2Q9P242 653 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 FEM1BQ9UK73 627 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 ATG2AQ2TAZ0 1938 aa18.09■□□□□ 0.49
NCSTN-210ENST00000465223 TRIOO75962 3097 aa18.08■□□□□ 0.49
NCSTN-210ENST00000465223 NBNO60934 754 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 LTBRP36941 435 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 CPT1AP50416 773 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 CHMP4BP1P59074 171 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 ATP8B2P98198 1209 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 TTF1Q15361 905 aaPredicted RBP18.08■□□□□ 0.48
NCSTN-210ENST00000465223 PTPROQ16827 1216 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 TIGD5Q53EQ6 642 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 TRIM67Q6ZTA4 783 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 OR6J1Q8NGC5 347 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 WDR11Q9BZH6 1224 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 CTNNA3Q9UI47 895 aa18.08■□□□□ 0.48
NCSTN-210ENST00000465223 COL19A1Q14993 1142 aa18.07■□□□□ 0.48
NCSTN-210ENST00000465223 RPAINQ86UA6 219 aa18.07■□□□□ 0.48
NCSTN-210ENST00000465223 SUGP1Q8IWZ8 645 aaKnown RBP18.07■□□□□ 0.48
NCSTN-210ENST00000465223 AMOTL1Q8IY63 956 aa18.07■□□□□ 0.48
NCSTN-210ENST00000465223 AFAP1L1Q8TED9 768 aa18.07■□□□□ 0.48
NCSTN-210ENST00000465223 ARHGAP45Q92619 1136 aa18.07■□□□□ 0.48
NCSTN-210ENST00000465223 ATOH1Q92858 354 aaPredicted RBP18.07■□□□□ 0.48
NCSTN-210ENST00000465223 TRERF1Q96PN7 1200 aa18.07■□□□□ 0.48
NCSTN-210ENST00000465223 CTAGE1Q96RT6 745 aa18.07■□□□□ 0.48
NCSTN-210ENST00000465223 CLIP2Q9UDT6 1046 aa18.07■□□□□ 0.48
NCSTN-210ENST00000465223 NOP58Q9Y2X3 529 aaKnown RBP18.07■□□□□ 0.48
NCSTN-210ENST00000465223 NLRC5Q86WI3 1866 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 ABHD14A-ACY1A0A1B0GW23 586 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 GOLIM4O00461 696 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 MBTPS2O43462 519 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 ALAS1P13196 640 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 PTPN11Q06124 597 aaPredicted RBP18.06■□□□□ 0.48
NCSTN-210ENST00000465223 DLX2Q07687 328 aaPredicted RBP18.06■□□□□ 0.48
NCSTN-210ENST00000465223 SMAD2Q15796 467 aaKnown RBP18.06■□□□□ 0.48
NCSTN-210ENST00000465223 PTGISQ16647 500 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 EPC2Q52LR7 807 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 MUM1L1Q5H9M0 696 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 CTR9Q6PD62 1173 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.06■□□□□ 0.48
NCSTN-210ENST00000465223 LRRC8DQ7L1W4 858 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 AACSQ86V21 672 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 C1orf115Q9H7X2 142 aa18.06■□□□□ 0.48
NCSTN-210ENST00000465223 SPTBN4Q9H254 2564 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 C5orf42Q9H799 3197 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 CXCL10P02778 98 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 CHGBP05060 677 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 SELPP16109 830 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 RASA1P20936 1047 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 VCPP55072 806 aaKnown RBP18.05■□□□□ 0.48
NCSTN-210ENST00000465223 GPM6BQ13491 265 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 CAGE1Q8TC20 777 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 MORC4Q8TE76 937 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 DHX38Q92620 1227 aaKnown RBP18.05■□□□□ 0.48
NCSTN-210ENST00000465223 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
NCSTN-210ENST00000465223 POP1Q99575 1024 aaKnown RBP18.05■□□□□ 0.48
NCSTN-210ENST00000465223 NSUN3Q9H649 340 aaKnown RBP18.05■□□□□ 0.48
NCSTN-210ENST00000465223 CYP39A1Q9NYL5 469 aa18.05■□□□□ 0.48
NCSTN-210ENST00000465223 ZFHX2Q9C0A1 2572 aaPredicted RBP18.05■□□□□ 0.48
NCSTN-210ENST00000465223 MYO7AQ13402 2215 aa18.04■□□□□ 0.48
NCSTN-210ENST00000465223 COL4A6Q14031 1691 aa18.04■□□□□ 0.48
NCSTN-210ENST00000465223 RARSP54136 660 aaKnown RBP18.04■□□□□ 0.48
NCSTN-210ENST00000465223 SNAP25P60880 206 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms