RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 ADD3Q9UEY8 706 aaKnown RBP17.3■□□□□ 0.36
MCF2L-220ENST00000464800 RAPGEFL1Q9UHV5 662 aa17.3■□□□□ 0.36
MCF2L-220ENST00000464800 SCN10AQ9Y5Y9 1956 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 TNKSO95271 1327 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 ICAM1P05362 532 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 CPT1AP50416 773 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 AAK1Q2M2I8 961 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 CCDC96Q2M329 555 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 VWCEQ96DN2 955 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 PURBQ96QR8 312 aaKnown RBP17.29■□□□□ 0.36
MCF2L-220ENST00000464800 DCTPP1Q9H773 170 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 MTMR7Q9Y216 660 aa17.29■□□□□ 0.36
MCF2L-220ENST00000464800 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.29■□□□□ 0.36
MCF2L-220ENST00000464800 ERC2O15083 957 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 NMT2O60551 498 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 CYP2C9P11712 490 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 ACTN1P12814 892 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 ALDH5A1P51649 535 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-220ENST00000464800 PURAQ00577 322 aaKnown RBP17.28■□□□□ 0.36
MCF2L-220ENST00000464800 TTLL4Q14679 1199 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 SKIV2LQ15477 1246 aaKnown RBP17.28■□□□□ 0.36
MCF2L-220ENST00000464800 TMEM67Q5HYA8 995 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 ZMYM1Q5SVZ6 1142 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 DEFB128Q7Z7B8 93 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 WDR11Q9BZH6 1224 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 IL17RBQ9NRM6 502 aa17.28■□□□□ 0.36
MCF2L-220ENST00000464800 RAD50Q92878 1312 aa17.27■□□□□ 0.36
MCF2L-220ENST00000464800 COL4A4P53420 1690 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-220ENST00000464800 LOC102724159A0A0B4J2E5 919 aa17.27■□□□□ 0.36
MCF2L-220ENST00000464800 GTPBP6O43824 516 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-220ENST00000464800 CA3P07451 260 aa17.27■□□□□ 0.36
MCF2L-220ENST00000464800 MYL3P08590 195 aa17.27■□□□□ 0.36
MCF2L-220ENST00000464800 TFF2Q03403 129 aa17.27■□□□□ 0.36
MCF2L-220ENST00000464800 CTDSPL2Q05D32 466 aa17.27■□□□□ 0.36
MCF2L-220ENST00000464800 BAATQ14032 418 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-220ENST00000464800 PWP2Q15269 919 aaKnown RBP17.27■□□□□ 0.36
MCF2L-220ENST00000464800 DCAF4Q8WV16 495 aa17.27■□□□□ 0.36
MCF2L-220ENST00000464800 NECAB3Q96P71 396 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-220ENST00000464800 RANBP17Q9H2T7 1088 aaKnown RBP17.27■□□□□ 0.36
MCF2L-220ENST00000464800 GPHNQ9NQX3 736 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-220ENST00000464800 PTPDC1A2A3K4 754 aa17.26■□□□□ 0.35
MCF2L-220ENST00000464800 RANBP6O60518 1105 aaKnown RBP17.26■□□□□ 0.35
MCF2L-220ENST00000464800 BMP1P13497 986 aa17.26■□□□□ 0.35
MCF2L-220ENST00000464800 RFC2P35250 354 aa17.26■□□□□ 0.35
MCF2L-220ENST00000464800 BRDTQ58F21 947 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-220ENST00000464800 FAM47CQ5HY64 1035 aa17.26■□□□□ 0.35
MCF2L-220ENST00000464800 OR6J1Q8NGC5 347 aa17.26■□□□□ 0.35
MCF2L-220ENST00000464800 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
MCF2L-220ENST00000464800 SLC9A7Q96T83 725 aa17.26■□□□□ 0.35
MCF2L-220ENST00000464800 MTG1Q9BT17 334 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-220ENST00000464800 PRRC2BQ5JSZ5 2229 aaKnown RBP17.26■□□□□ 0.35
MCF2L-220ENST00000464800 TRANK1O15050 2925 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 REV3LO60673 3130 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 NFIBO00712 420 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 POU3F3P20264 500 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-220ENST00000464800 SLC16A2P36021 539 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 PLA2G5P39877 138 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 KCNQ1P51787 676 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 SYDE2Q5VT97 1194 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 C1QTNF1Q9BXJ1 281 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 INCENPQ9NQS7 918 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 MTCH2Q9Y6C9 303 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 PTPRSQ13332 1948 aa17.25■□□□□ 0.35
MCF2L-220ENST00000464800 RBM47A0AV96 593 aaKnown RBP17.24■□□□□ 0.35
MCF2L-220ENST00000464800 PITPNM1O00562 1244 aa17.24■□□□□ 0.35
MCF2L-220ENST00000464800 NKRFO15226 690 aaKnown RBP eCLIP17.24■□□□□ 0.35
MCF2L-220ENST00000464800 FOXP2O15409 715 aa17.24■□□□□ 0.35
MCF2L-220ENST00000464800 PPP2R5BQ15173 497 aa17.24■□□□□ 0.35
MCF2L-220ENST00000464800 NBPF20Q3BBV1 942 aa17.24■□□□□ 0.35
MCF2L-220ENST00000464800 NFRKBQ6P4R8 1299 aa17.24■□□□□ 0.35
MCF2L-220ENST00000464800 BTNL9Q6UXG8 535 aa17.24■□□□□ 0.35
MCF2L-220ENST00000464800 SLC30A10Q6XR72 485 aa17.24■□□□□ 0.35
MCF2L-220ENST00000464800 MPHOSPH6Q99547 160 aaKnown RBP17.24■□□□□ 0.35
MCF2L-220ENST00000464800 CERS4Q9HA82 394 aa17.24■□□□□ 0.35
MCF2L-220ENST00000464800 ANAPC4Q9UJX5 808 aa17.24■□□□□ 0.35
MCF2L-220ENST00000464800 RFXAPO00287 272 aa17.23■□□□□ 0.35
MCF2L-220ENST00000464800 ORC4O43929 436 aa17.23■□□□□ 0.35
MCF2L-220ENST00000464800 CALML3P27482 149 aa17.23■□□□□ 0.35
MCF2L-220ENST00000464800 NOVP48745 357 aa17.23■□□□□ 0.35
MCF2L-220ENST00000464800 PDE4DQ08499 809 aa17.23■□□□□ 0.35
MCF2L-220ENST00000464800 TTBK2Q6IQ55 1244 aa17.23■□□□□ 0.35
MCF2L-220ENST00000464800 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
MCF2L-220ENST00000464800 PHOSPHO2Q8TCD6 241 aa17.23■□□□□ 0.35
MCF2L-220ENST00000464800 FAM122AQ96E09 287 aa17.23■□□□□ 0.35
MCF2L-220ENST00000464800 FRMPD2Q68DX3 1309 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-220ENST00000464800 EPOPA6NHQ4 379 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 KPNA6O60684 536 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 IQCF3P0C7M6 154 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
MCF2L-220ENST00000464800 BFSP2Q13515 415 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 OTUD7AQ8TE49 926 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-220ENST00000464800 SCFD2Q8WU76 684 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 ARNTL2Q8WYA1 636 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 FTOQ9C0B1 505 aaKnown RBP eCLIP17.22■□□□□ 0.35
MCF2L-220ENST00000464800 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 PNMA2Q9UL42 364 aa17.22■□□□□ 0.35
MCF2L-220ENST00000464800 COG5Q9UP83 839 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms