RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 CTNNAL1Q9UBT7 734 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 SLC12A4Q9UP95 1085 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 EMILIN1Q9Y6C2 1016 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 RIMS2Q9UQ26 1411 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 NEXMIFQ5QGS0 1516 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 HMGB1P1B2RPK0 211 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 NQO1P15559 274 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 CCT6AP40227 531 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 ADKP55263 362 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 ATP11AP98196 1134 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 MYL5Q02045 173 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 ST3GAL1Q11201 340 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 MAP7Q14244 749 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 GIGYF2Q6Y7W6 1299 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 RASGRP2Q7LDG7 609 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 CACNA2D4Q7Z3S7 1137 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 FSIP1Q8NA03 581 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 MLKLQ8NB16 471 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 PTPRN2Q92932 1015 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 HIC2Q96JB3 615 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 MAML3Q96JK9 1138 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 AGBL1Q96MI9 1066 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 EIF2AQ9BY44 585 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 SIL1Q9H173 461 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 GGNBP2Q9H3C7 697 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 QPCTLQ9NXS2 382 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 CYP46A1Q9Y6A2 500 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 XRN1Q8IZH2 1706 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 BIRC5O15392 142 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 HNRNPRO43390 633 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 HIP1RO75146 1068 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 VAMP4O75379 141 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 LDHAP00338 332 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 PDGFRBP09619 1106 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 KCNA2P16389 499 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 LACTBP83111 547 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 PDE4BQ07343 736 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 ITGA7Q13683 1181 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 P3H1Q32P28 736 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 TMEM132EQ6IEE7 984 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 CEP85Q6P2H3 762 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 LARP1Q6PKG0 1096 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 RUFY4Q6ZNE9 571 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 TRAPPC11Q7Z392 1133 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 ANKRD13BQ86YJ7 626 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 NECAB1Q8N987 351 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 ANKK1Q8NFD2 765 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 USP33Q8TEY7 942 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 ANKRD24Q8TF21 1146 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 NOC3LQ8WTT2 800 aaKnown RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 AZIN2Q96A70 460 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 TM6SF1Q9BZW5 370 aa7.82□□□□□ -1.16
CDKL5-203ENST00000463994 CTDP1Q9Y5B0 961 aaPredicted RBP7.82□□□□□ -1.16
CDKL5-203ENST00000463994 KIF20BQ96Q89 1820 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 DYTNA2CJ06 578 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 KDM1AO60341 852 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 DTNBO60941 627 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 RESTQ13127 1097 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 BYSLQ13895 437 aaKnown RBP7.81□□□□□ -1.16
CDKL5-203ENST00000463994 MTF1Q14872 753 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 MEX3CQ5U5Q3 659 aaKnown RBP7.81□□□□□ -1.16
CDKL5-203ENST00000463994 IRGCQ6NXR0 463 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 RSPH3Q86UC2 560 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 TRIM50Q86XT4 487 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 SPICE1Q8N0Z3 855 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 ANKS4BQ8N8V4 417 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 FBF1Q8TES7 1133 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 PMM1Q92871 262 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 ATP6V0A1Q93050 837 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 ATP6V1G3Q96LB4 118 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 ZIM3Q96PE6 472 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 GBP5Q96PP8 586 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 MIS12Q9H081 205 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 HSD3B7Q9H2F3 369 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 CHMP2BQ9UQN3 213 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 TBX22Q9Y458 520 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 COMMD3-BMI1R4GMX3 469 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 ATP10DQ9P241 1426 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 SOWAHDA6NJG2 315 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 TMEM110-MUSTN1A8MSY1 372 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 FYB1O15117 783 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 CETN3O15182 167 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 WDR46O15213 610 aaKnown RBP7.81□□□□□ -1.16
CDKL5-203ENST00000463994 ACADSP16219 412 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 GBP1P32455 592 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 TCF7P36402 384 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-203ENST00000463994 MTTPP55157 894 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 MCL1Q07820 350 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 DMPKQ09013 629 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 PAK2Q13177 524 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 LSAMPQ13449 338 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 QPCTQ16769 361 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 GJC2Q5T442 439 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-203ENST00000463994 CFAP58Q5T655 872 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 CCDC102BQ68D86 513 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 GRAMD4Q6IC98 578 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 CPLX4Q7Z7G2 160 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 CD302Q8IX05 232 aa7.81□□□□□ -1.16
CDKL5-203ENST00000463994 FMR1NBQ8N0W7 255 aaPredicted RBP7.81□□□□□ -1.16
CDKL5-203ENST00000463994 CAVIN3Q969G5 261 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms