RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 CFAP73A6NFT4 308 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 EXOC3O60645 756 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 SRGAP2O75044 1071 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 FTCDO95954 541 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 ITIH3Q06033 890 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 ADCY2Q08462 1091 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 MAGOHBQ96A72 148 aaKnown RBP17.29■□□□□ 0.36
SMC4-204ENST00000462787 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
SMC4-204ENST00000462787 FMO2Q99518 471 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 MRPL44Q9H9J2 332 aaKnown RBP17.29■□□□□ 0.36
SMC4-204ENST00000462787 EIF3HO15372 352 aaKnown RBP eCLIP17.29■□□□□ 0.368e-6■□□□□ 10.6
SMC4-204ENST00000462787 SASH1O94885 1247 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 GCNT3O95395 438 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 SERPING1P05155 500 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 LMNB1P20700 586 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 POLE2P56282 527 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 FAM26FQ5R3K3 315 aa17.29■□□□□ 0.36
SMC4-204ENST00000462787 ATF2P15336 505 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 TTLL7Q6ZT98 887 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 NUF2Q9BZD4 464 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 BATF3Q9NR55 127 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 SMCO2A6NFE2 343 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 LGALS16A8MUM7 142 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 TECP42680 631 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 PLTPP55058 493 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 PTPROQ16827 1216 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 ATP6V1G3Q96LB4 118 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 SH3GL3Q99963 347 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 ARHGAP42A6NI28 874 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 LMNAP02545 664 aaKnown RBP17.28■□□□□ 0.36
SMC4-204ENST00000462787 ELF1P32519 619 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 NAA35Q5VZE5 725 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 NEK8Q86SG6 692 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 RFX7Q2KHR2 1363 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 RASGRF2O14827 1237 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 STRN3Q13033 797 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 ARHGAP44Q17R89 818 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
SMC4-204ENST00000462787 PANK4Q9NVE7 773 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 PCDHB6Q9Y5E3 794 aa17.28■□□□□ 0.36
SMC4-204ENST00000462787 SART1O43290 800 aaKnown RBP17.27■□□□□ 0.36
SMC4-204ENST00000462787 LIFRP42702 1097 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 ADAM9Q13443 819 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 ADAT2Q7Z6V5 191 aaKnown RBP17.27■□□□□ 0.36
SMC4-204ENST00000462787 PSMD1Q99460 953 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 PDE6CP51160 858 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 COG7P83436 770 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 ZMYND12Q9H0C1 365 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 EXOC7Q9UPT5 735 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 EXOC3L4Q17RC7 722 aa17.27■□□□□ 0.36
SMC4-204ENST00000462787 IGSF1Q8N6C5 1336 aa17.27■□□□□ 0.35
SMC4-204ENST00000462787 PPP2R2AP63151 447 aa17.27■□□□□ 0.35
SMC4-204ENST00000462787 GPBP1Q86WP2 473 aa17.27■□□□□ 0.35
SMC4-204ENST00000462787 GSPT2Q8IYD1 628 aaKnown RBP17.27■□□□□ 0.35
SMC4-204ENST00000462787 PCDHB13Q9Y5F0 798 aa17.27■□□□□ 0.35
SMC4-204ENST00000462787 NR5A1Q13285 461 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 ELAC2Q9BQ52 826 aaKnown RBP17.26■□□□□ 0.35
SMC4-204ENST00000462787 ARPP21Q9UBL0 812 aaPredicted RBP17.26■□□□□ 0.35
SMC4-204ENST00000462787 ATP5HO75947 161 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 MMEP08473 750 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 FBXW10Q5XX13 1052 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 CAPRIN2Q6IMN6 1127 aaKnown RBP17.26■□□□□ 0.35
SMC4-204ENST00000462787 FAF1Q9UNN5 650 aaPredicted RBP17.26■□□□□ 0.35
SMC4-204ENST00000462787 MYCT1Q8N699 235 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 EPN3Q9H201 632 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 MAP3K7O43318 606 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 PPP1R37O75864 691 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 TFAP4Q01664 338 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 LRRC24Q50LG9 513 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 GPCPD1Q9NPB8 672 aa17.26■□□□□ 0.35
SMC4-204ENST00000462787 FKBP3Q00688 224 aaKnown RBP17.25■□□□□ 0.35
SMC4-204ENST00000462787 PICALMQ13492 652 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 SAMD9LQ8IVG5 1584 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 HMGB2P26583 209 aaKnown RBP17.25■□□□□ 0.35
SMC4-204ENST00000462787 DPF2Q92785 391 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 EEF2KMTQ96G04 330 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 FNBP1Q96RU3 617 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 WDR19Q8NEZ3 1342 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 PARP10Q53GL7 1025 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 SCYL3Q8IZE3 742 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 SPDL1Q96EA4 605 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 SUDS3Q9H7L9 328 aaPredicted RBP17.25■□□□□ 0.35
SMC4-204ENST00000462787 GRID2IPA4D2P6 1211 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 DYNC1I2Q13409 638 aaKnown RBP17.25■□□□□ 0.35
SMC4-204ENST00000462787 PALM2Q8IXS6 379 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 EPSTI1Q96J88 318 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 AIFM3Q96NN9 605 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 NDST4Q9H3R1 872 aa17.25■□□□□ 0.35
SMC4-204ENST00000462787 PPFIA2O75334 1257 aa17.24■□□□□ 0.35
SMC4-204ENST00000462787 MYO1EQ12965 1108 aa17.24■□□□□ 0.35
SMC4-204ENST00000462787 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
SMC4-204ENST00000462787 LAMC1P11047 1609 aa17.24■□□□□ 0.35
SMC4-204ENST00000462787 ARHGEF35A5YM69 484 aa17.24■□□□□ 0.35
SMC4-204ENST00000462787 N4BP1O75113 896 aaKnown RBP17.24■□□□□ 0.35
SMC4-204ENST00000462787 IL2RBP14784 551 aa17.24■□□□□ 0.35
SMC4-204ENST00000462787 SMTNP53814 917 aa17.24■□□□□ 0.35
SMC4-204ENST00000462787 SLC20A2Q08357 652 aa17.24■□□□□ 0.35
SMC4-204ENST00000462787 ARL6IP4Q66PJ3 421 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms