RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 FEZ1Q99689 392 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 PCDHA1Q9Y5I3 950 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 PPP2R3BQ9Y5P8 575 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 PP2D1A8MPX8 630 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 CASP1P29466 404 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 KARSQ15046 597 aaKnown RBP16.37■□□□□ 0.21
HDAC6-213ENST00000462730 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 SPATA20Q8TB22 786 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 HOOK2Q96ED9 719 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 FZD1Q9UP38 647 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 PITPNM2Q9BZ72 1349 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 POLR2AP24928 1970 aaKnown RBP16.36■□□□□ 0.21
HDAC6-213ENST00000462730 STAT6P42226 847 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 MYL5Q02045 173 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 DPYDQ12882 1025 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 GPR162Q16538 588 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 RASSF8Q8NHQ8 419 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 WRNIP1Q96S55 665 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 GLT8D2Q9H1C3 349 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 DISC1Q9NRI5 854 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 GINM1Q9NU53 330 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 PRR12Q9ULL5 1215 aa16.36■□□□□ 0.21
HDAC6-213ENST00000462730 TDP2O95551 362 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 UBA7P41226 1012 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
HDAC6-213ENST00000462730 DNTTIP2Q5QJE6 756 aaKnown RBP16.35■□□□□ 0.21
HDAC6-213ENST00000462730 MLKLQ8NB16 471 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 STAMQ92783 540 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 MRFAP1L1Q96HT8 127 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 AMNQ9BXJ7 453 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 TTC12Q9H892 705 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-213ENST00000462730 DACH1Q9UI36 760 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 EDIL3O43854 480 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 TPM3P06753 285 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 CALCRLQ16602 461 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 FBXO11Q86XK2 927 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 AK8Q96MA6 479 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 CCSER1Q9C0I3 900 aa16.35■□□□□ 0.21
HDAC6-213ENST00000462730 GTPBP6O43824 516 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-213ENST00000462730 SLC37A4O43826 429 aa16.34■□□□□ 0.21
HDAC6-213ENST00000462730 RRAGBQ5VZM2 374 aa16.34■□□□□ 0.21
HDAC6-213ENST00000462730 SCYL3Q8IZE3 742 aa16.34■□□□□ 0.21
HDAC6-213ENST00000462730 MYRIPQ8NFW9 859 aa16.34■□□□□ 0.21
HDAC6-213ENST00000462730 BLZF1Q9H2G9 400 aa16.34■□□□□ 0.21
HDAC6-213ENST00000462730 ZNF112Q9UJU3 913 aa16.34■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L15C9J2P7 530 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L13C9JLJ4 530 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L11C9JVI0 530 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L18D6R9N7 530 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L22D6RA61 530 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L17D6RBQ6 530 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L19D6RCP7 530 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L20D6RJB6 530 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 PTGS1P23219 599 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L24Q0WX57 530 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USH1GQ495M9 461 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 DPY19L2Q6NUT2 758 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 USP17L6PQ6QN14 398 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 CABP7Q86V35 215 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 ZKSCAN4Q969J2 545 aaPredicted RBP16.33■□□□□ 0.21
HDAC6-213ENST00000462730 PRIMPOLQ96LW4 560 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 SPTLC3Q9NUV7 552 aa16.33■□□□□ 0.21
HDAC6-213ENST00000462730 TAL1P17542 331 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-213ENST00000462730 TECP42680 631 aa16.33■□□□□ 0.2
HDAC6-213ENST00000462730 TXKP42681 527 aa16.33■□□□□ 0.2
HDAC6-213ENST00000462730 KIFC2Q96AC6 838 aa16.33■□□□□ 0.2
HDAC6-213ENST00000462730 L3MBTL3Q96JM7 780 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-213ENST00000462730 GSDMAQ96QA5 445 aa16.33■□□□□ 0.2
HDAC6-213ENST00000462730 MTMR9Q96QG7 549 aa16.33■□□□□ 0.2
HDAC6-213ENST00000462730 PLIN2Q99541 437 aa16.33■□□□□ 0.2
HDAC6-213ENST00000462730 MTRQ99707 1265 aa16.33■□□□□ 0.2
HDAC6-213ENST00000462730 KIAA1683Q9H0B3 1180 aa16.33■□□□□ 0.2
HDAC6-213ENST00000462730 NRBP1Q9UHY1 535 aa16.33■□□□□ 0.2
HDAC6-213ENST00000462730 FMR1Q06787 632 aaKnown RBP eCLIP16.32■□□□□ 0.2
HDAC6-213ENST00000462730 DGKZQ13574 1117 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 MTMR2Q13614 643 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 CUL4BQ13620 913 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 NAALADL2Q58DX5 795 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 CCDC186Q7Z3E2 898 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 KLRG1Q96E93 195 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 ANO3Q9BYT9 981 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 HSD3B7Q9H2F3 369 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 FBXO28Q9NVF7 368 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 IFNKQ9P0W0 207 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 PHIPQ8WWQ0 1821 aa16.32■□□□□ 0.2
HDAC6-213ENST00000462730 ADM5C9JUS6 153 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 PLA2G6O60733 806 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 TMEM266Q2M3C6 531 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 PPP4R3AQ6IN85 833 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 LPAR1Q92633 364 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 DCPSQ96C86 337 aaKnown RBP16.31■□□□□ 0.2
HDAC6-213ENST00000462730 KCNF1Q9H3M0 494 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 DDX25Q9UHL0 483 aaKnown RBP16.31■□□□□ 0.2
HDAC6-213ENST00000462730 FEM1BQ9UK73 627 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 PAPPA2Q9BXP8 1791 aa16.31■□□□□ 0.2
HDAC6-213ENST00000462730 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms