RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 SEC23AQ15436 765 aa21.53■■□□□ 1.04
COL9A2-205ENST00000461118 TMEM240Q5SV17 173 aa21.53■■□□□ 1.04
COL9A2-205ENST00000461118 CYB5R4Q7L1T6 521 aa21.53■■□□□ 1.04
COL9A2-205ENST00000461118 TAF6LQ9Y6J9 622 aa21.53■■□□□ 1.04
COL9A2-205ENST00000461118 CHD7Q9P2D1 2997 aa21.53■■□□□ 1.04
COL9A2-205ENST00000461118 ICAM1P05362 532 aa21.52■■□□□ 1.04
COL9A2-205ENST00000461118 PBX2P40425 430 aa21.52■■□□□ 1.04
COL9A2-205ENST00000461118 GJA9P57773 515 aa21.52■■□□□ 1.04
COL9A2-205ENST00000461118 NKX3-2P78367 333 aa21.52■■□□□ 1.04
COL9A2-205ENST00000461118 CCDC144BQ3MJ40 725 aa21.52■■□□□ 1.04
COL9A2-205ENST00000461118 FAM126BQ8IXS8 530 aa21.52■■□□□ 1.04
COL9A2-205ENST00000461118 NCOA7Q8NI08 942 aa21.52■■□□□ 1.04
COL9A2-205ENST00000461118 ACAD9Q9H845 621 aa21.52■■□□□ 1.04
COL9A2-205ENST00000461118 GRXCR1A8MXD5 290 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 C6orf222P0C671 652 aaPredicted RBP21.51■■□□□ 1.03
COL9A2-205ENST00000461118 CSF2RAP15509 400 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 SNAP25P60880 206 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 CCDC174Q6PII3 467 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 STOX1Q6ZVD7 989 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 ANKRD35Q8N283 1001 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 TIFAQ96CG3 184 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 GLT1D1Q96MS3 346 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 TRERF1Q96PN7 1200 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 PBX4Q9BYU1 374 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 ABHD16BQ9H3Z7 469 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 RNF146Q9NTX7 359 aa21.51■■□□□ 1.03
COL9A2-205ENST00000461118 CDC45O75419 566 aa21.5■■□□□ 1.03
COL9A2-205ENST00000461118 NECTIN1Q15223 517 aa21.5■■□□□ 1.03
COL9A2-205ENST00000461118 IFIT1BQ5T764 474 aaKnown RBP21.5■■□□□ 1.03
COL9A2-205ENST00000461118 ARMCX2Q7L311 632 aa21.5■■□□□ 1.03
COL9A2-205ENST00000461118 RALYLQ86SE5 291 aaKnown RBP21.5■■□□□ 1.03
COL9A2-205ENST00000461118 PCSK9Q8NBP7 692 aaKnown RBP21.5■■□□□ 1.03
COL9A2-205ENST00000461118 HOMER2Q9NSB8 354 aa21.5■■□□□ 1.03
COL9A2-205ENST00000461118 PNMA2Q9UL42 364 aa21.5■■□□□ 1.03
COL9A2-205ENST00000461118 ASTN1O14525 1302 aa21.5■■□□□ 1.03
COL9A2-205ENST00000461118 MROH7Q68CQ1 1323 aa21.5■■□□□ 1.03
COL9A2-205ENST00000461118 ARVCFO00192 962 aa21.49■■□□□ 1.03
COL9A2-205ENST00000461118 CD4P01730 458 aa21.49■■□□□ 1.03
COL9A2-205ENST00000461118 ALAS1P13196 640 aa21.49■■□□□ 1.03
COL9A2-205ENST00000461118 ASPRV1Q53RT3 343 aa21.49■■□□□ 1.03
COL9A2-205ENST00000461118 CASC1Q6TDU7 716 aa21.49■■□□□ 1.03
COL9A2-205ENST00000461118 CCDC144CPQ8IYA2 1237 aa21.49■■□□□ 1.03
COL9A2-205ENST00000461118 SYMPKQ92797 1274 aaKnown RBP21.49■■□□□ 1.03
COL9A2-205ENST00000461118 ANO2Q9NQ90 1003 aa21.49■■□□□ 1.03
COL9A2-205ENST00000461118 PPP4R2Q9NY27 417 aa21.49■■□□□ 1.03
COL9A2-205ENST00000461118 CCPG1Q9ULG6 757 aa21.49■■□□□ 1.03
COL9A2-205ENST00000461118 GOLGA8HP0CJ92 632 aa21.48■■□□□ 1.03
COL9A2-205ENST00000461118 CNTN2Q02246 1040 aa21.48■■□□□ 1.03
COL9A2-205ENST00000461118 PPIGQ13427 754 aaKnown RBP eCLIP21.48■■□□□ 1.035e-11■□□□□ 11.2
COL9A2-205ENST00000461118 MB21D2Q8IYB1 491 aaPredicted RBP21.48■■□□□ 1.03
COL9A2-205ENST00000461118 FAM133AQ8N9E0 248 aa21.48■■□□□ 1.03
COL9A2-205ENST00000461118 A1CFQ9NQ94 594 aaKnown RBP21.48■■□□□ 1.03
COL9A2-205ENST00000461118 WDR19Q8NEZ3 1342 aa21.48■■□□□ 1.03
COL9A2-205ENST00000461118 A0A0U1RQG5 324 aaPredicted RBP21.47■■□□□ 1.03
COL9A2-205ENST00000461118 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.47■■□□□ 1.03
COL9A2-205ENST00000461118 IFIT3O14879 490 aaKnown RBP21.47■■□□□ 1.03
COL9A2-205ENST00000461118 SLC27A2O14975 620 aa21.47■■□□□ 1.03
COL9A2-205ENST00000461118 ACRP10323 421 aa21.47■■□□□ 1.03
COL9A2-205ENST00000461118 SART3Q15020 963 aaKnown RBP21.47■■□□□ 1.03
COL9A2-205ENST00000461118 MUM1L1Q5H9M0 696 aa21.47■■□□□ 1.03
COL9A2-205ENST00000461118 TJAP1Q5JTD0 557 aa21.47■■□□□ 1.03
COL9A2-205ENST00000461118 GNASQ5JWF2 1037 aa21.47■■□□□ 1.03
COL9A2-205ENST00000461118 ZNF365Q70YC5 407 aa21.47■■□□□ 1.03
COL9A2-205ENST00000461118 SLC43A3Q8NBI5 491 aa21.47■■□□□ 1.03
COL9A2-205ENST00000461118 MTA3Q9BTC8 594 aa21.47■■□□□ 1.03
COL9A2-205ENST00000461118 UBA5Q9GZZ9 404 aa21.47■■□□□ 1.03
COL9A2-205ENST00000461118 ERICH2A1L162 156 aa21.46■■□□□ 1.03
COL9A2-205ENST00000461118 PARP1P09874 1014 aaKnown RBP21.46■■□□□ 1.03
COL9A2-205ENST00000461118 ANTXR2P58335 489 aa21.46■■□□□ 1.03
COL9A2-205ENST00000461118 CREB3L3Q68CJ9 461 aa21.46■■□□□ 1.03
COL9A2-205ENST00000461118 IGDCC4Q8TDY8 1250 aa21.46■■□□□ 1.03
COL9A2-205ENST00000461118 PPP1R12CQ9BZL4 782 aa21.46■■□□□ 1.03
COL9A2-205ENST00000461118 GNEQ9Y223 722 aaKnown RBP21.46■■□□□ 1.03
COL9A2-205ENST00000461118 SOWAHBA6NEL2 793 aa21.45■■□□□ 1.02
COL9A2-205ENST00000461118 PTGS1P23219 599 aa21.45■■□□□ 1.02
COL9A2-205ENST00000461118 CYP2C18P33260 490 aa21.45■■□□□ 1.02
COL9A2-205ENST00000461118 BEX3Q00994 111 aa21.45■■□□□ 1.02
COL9A2-205ENST00000461118 ADGRE1Q14246 886 aa21.45■■□□□ 1.02
COL9A2-205ENST00000461118 TMEM199Q8N511 208 aa21.45■■□□□ 1.02
COL9A2-205ENST00000461118 CYP39A1Q9NYL5 469 aa21.45■■□□□ 1.02
COL9A2-205ENST00000461118 CXXC1Q9P0U4 656 aaPredicted RBP21.45■■□□□ 1.02
COL9A2-205ENST00000461118 GRIN2DO15399 1336 aa21.45■■□□□ 1.02
COL9A2-205ENST00000461118 UMODL1Q5DID0 1318 aa21.45■■□□□ 1.02
COL9A2-205ENST00000461118 TRANK1O15050 2925 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 WTAPQ15007 396 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 CHST3Q7LGC8 479 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 ADGRF4Q8IZF3 695 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 HERVK_113Q902F9 699 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 VWCEQ96DN2 955 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 CPVLQ9H3G5 476 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 PRDM12Q9H4Q4 367 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 SPC25Q9HBM1 224 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 DDX49Q9Y6V7 483 aaKnown RBP21.44■■□□□ 1.02
COL9A2-205ENST00000461118 SCN5AQ14524 2016 aa21.44■■□□□ 1.02
COL9A2-205ENST00000461118 NCOR1O75376 2440 aa21.43■■□□□ 1.02
COL9A2-205ENST00000461118 PALM3A6NDB9 673 aaPredicted RBP21.43■■□□□ 1.02
COL9A2-205ENST00000461118 MCM5P33992 734 aa21.43■■□□□ 1.02
COL9A2-205ENST00000461118 TROAPQ12815 778 aa21.43■■□□□ 1.02
COL9A2-205ENST00000461118 TMEM67Q5HYA8 995 aa21.43■■□□□ 1.02
COL9A2-205ENST00000461118 RNF20Q5VTR2 975 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms