RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 CHURC1Q8WUH1 139 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 GPATCH3Q96I76 525 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 AGBL1Q96MI9 1066 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 CRBNQ96SW2 442 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 LRFN3Q9BTN0 628 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 ALDH8A1Q9H2A2 487 aaPredicted RBP9.38□□□□□ -0.91
HPS4-207ENST00000459918 EPHX3Q9H6B9 360 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 PDGFCQ9NRA1 345 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 POLR3EQ9NVU0 708 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 CCPG1Q9ULG6 757 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 STX8Q9UNK0 236 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 GNEQ9Y223 722 aaKnown RBP9.38□□□□□ -0.91
HPS4-207ENST00000459918 MTCH2Q9Y6C9 303 aa9.38□□□□□ -0.91
HPS4-207ENST00000459918 DDX49Q9Y6V7 483 aaKnown RBP9.38□□□□□ -0.91
HPS4-207ENST00000459918 SOWAHBA6NEL2 793 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 CCER2I3L3R5 266 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 TLL1O43897 1013 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 SNAP25P60880 206 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 CSPP1Q1MSJ5 1256 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 TKFCQ3LXA3 575 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 SBK1Q52WX2 424 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 IQSEC1Q6DN90 963 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 RPAP2Q8IXW5 612 aaPredicted RBP9.37□□□□□ -0.91
HPS4-207ENST00000459918 SLC43A3Q8NBI5 491 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 OR6J1Q8NGC5 347 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 UIMC1Q96RL1 719 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 STRBPQ96SI9 672 aaKnown RBP9.37□□□□□ -0.91
HPS4-207ENST00000459918 MPHOSPH6Q99547 160 aaKnown RBP9.37□□□□□ -0.91
HPS4-207ENST00000459918 NACAP1Q9BZK3 213 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 KATNBL1Q9H079 304 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 VTA1Q9NP79 307 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 MTMR4Q9NYA4 1195 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 ADD3Q9UEY8 706 aaKnown RBP9.37□□□□□ -0.91
HPS4-207ENST00000459918 MTUS1Q9ULD2 1270 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 PRRC2BQ5JSZ5 2229 aaKnown RBP9.37□□□□□ -0.91
HPS4-207ENST00000459918 LCTP09848 1927 aa9.37□□□□□ -0.91
HPS4-207ENST00000459918 GRIN2DO15399 1336 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 PTPDC1A2A3K4 754 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 GSG1L2A8MUP6 293 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 GNAT2P19087 354 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 MCCP23508 829 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 SSTR3P32745 418 aaPredicted RBP9.36□□□□□ -0.91
HPS4-207ENST00000459918 RFC2P35250 354 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 TFAP4Q01664 338 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 BFSP2Q13515 415 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 GIMAP6Q6P9H5 292 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 KCTD1Q719H9 257 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.36□□□□□ -0.91
HPS4-207ENST00000459918 HERC6Q8IVU3 1022 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 CCDC155Q8N6L0 562 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 STAG1Q8WVM7 1258 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 APPBP2Q92624 585 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 MTG1Q9BT17 334 aaPredicted RBP9.36□□□□□ -0.91
HPS4-207ENST00000459918 WDR11Q9BZH6 1224 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 LRRCC1Q9C099 1032 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 DDX19BQ9UMR2 479 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 SYNPO2Q9UMS6 1093 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 Q9Y3F1 56 aa9.36□□□□□ -0.91
HPS4-207ENST00000459918 TSPY2A6NKD2 308 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 GPAA1O43292 621 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 CALML3P27482 149 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 NKX3-2P78367 333 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 PPP2R5BQ15173 497 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 LRRFIP1Q32MZ4 808 aaKnown RBP9.35□□□□□ -0.91
HPS4-207ENST00000459918 MUM1L1Q5H9M0 696 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 PPP4R3BQ5MIZ7 849 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 PHOSPHO2Q8TCD6 241 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 GDPD5Q8WTR4 605 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 PPP1R13LQ8WUF5 828 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 MKL1Q969V6 931 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 NAPBQ9H115 298 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 CHMP4BQ9H444 224 aaKnown RBP9.35□□□□□ -0.91
HPS4-207ENST00000459918 ECHDC1Q9NTX5 307 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 CYP39A1Q9NYL5 469 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 PTPRSQ13332 1948 aa9.35□□□□□ -0.91
HPS4-207ENST00000459918 ZNF536O15090 1300 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 TRIP12Q14669 1992 aaPredicted RBP9.34□□□□□ -0.91
HPS4-207ENST00000459918 SIP14410 1827 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 EPOPA6NHQ4 379 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 RNF113AO15541 343 aaKnown RBP9.34□□□□□ -0.91
HPS4-207ENST00000459918 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.91
HPS4-207ENST00000459918 ZFYP08048 801 aaPredicted RBP9.34□□□□□ -0.91
HPS4-207ENST00000459918 ALDH5A1P51649 535 aaPredicted RBP9.34□□□□□ -0.91
HPS4-207ENST00000459918 PURAQ00577 322 aaKnown RBP9.34□□□□□ -0.91
HPS4-207ENST00000459918 TAP1Q03518 808 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 PDE4DQ08499 809 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 GRB10Q13322 594 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 NBPF20Q3BBV1 942 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 DUSP28Q4G0W2 176 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 TMEM63BQ5T3F8 832 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 TAPT1Q6NXT6 567 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 EP400NLQ6ZTU2 488 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 NEDD1Q8NHV4 660 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 GMCL1Q96IK5 515 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 PURBQ96QR8 312 aaKnown RBP9.34□□□□□ -0.91
HPS4-207ENST00000459918 TOMM22Q9NS69 142 aa9.34□□□□□ -0.91
HPS4-207ENST00000459918 PRR12Q9ULL5 1215 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms