RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ANAPC15P60006 121 aa18.69■□□□□ 0.58
CD28-203ENST00000458610 COL9A3Q14050 684 aaPredicted RBP18.69■□□□□ 0.58
CD28-203ENST00000458610 RTN1Q16799 776 aa18.69■□□□□ 0.58
CD28-203ENST00000458610 MORC4Q8TE76 937 aa18.69■□□□□ 0.58
CD28-203ENST00000458610 NSUN6Q8TEA1 469 aaKnown RBP18.69■□□□□ 0.58
CD28-203ENST00000458610 C11orf49Q9H6J7 331 aa18.69■□□□□ 0.58
CD28-203ENST00000458610 SPC25Q9HBM1 224 aa18.69■□□□□ 0.58
CD28-203ENST00000458610 VTA1Q9NP79 307 aa18.69■□□□□ 0.58
CD28-203ENST00000458610 DNM1LO00429 736 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 CFBP00751 764 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 RXRAP19793 462 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 PDE4DQ08499 809 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 IQSEC1Q6DN90 963 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 SLC30A10Q6XR72 485 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 TMTC3Q6ZXV5 915 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 RNF180Q86T96 592 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 SRBD1Q8N5C6 995 aaKnown RBP18.68■□□□□ 0.58
CD28-203ENST00000458610 SYTL5Q8TDW5 730 aaPredicted RBP18.68■□□□□ 0.58
CD28-203ENST00000458610 BRF1Q92994 677 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 XPNPEP3Q9NQH7 507 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 BRPF3Q9ULD4 1205 aa18.68■□□□□ 0.58
CD28-203ENST00000458610 GOLGA8AA7E2F4 631 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 GOLGA8BA8MQT2 603 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 KBTBD13C9JR72 458 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 GCOM1H8Y6P7 765 aaPredicted RBP18.67■□□□□ 0.58
CD28-203ENST00000458610 DUSP11O75319 330 aaKnown RBP18.67■□□□□ 0.58
CD28-203ENST00000458610 PLEKHA8P1O95397 391 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 POLR2MP0CAP2 368 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 GHRHRQ02643 423 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 SLC35G1Q2M3R5 365 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 CCDC144BQ3MJ40 725 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 PIBF1Q8WXW3 757 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 DPF3Q92784 378 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 IWS1Q96ST2 819 aa18.67■□□□□ 0.58
CD28-203ENST00000458610 PPP1R11O60927 126 aaPredicted RBP18.66■□□□□ 0.58
CD28-203ENST00000458610 CPA1P15085 419 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 METAP2P50579 478 aaKnown RBP eCLIP18.66■□□□□ 0.58
CD28-203ENST00000458610 TNFAIP2Q03169 654 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 ARHGEF16Q5VV41 709 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 ANO1Q5XXA6 986 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 NOL8Q76FK4 1167 aaKnown RBP18.66■□□□□ 0.58
CD28-203ENST00000458610 RAB11FIP4Q86YS3 637 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 CUL5Q93034 780 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 RMDN3Q96TC7 470 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 AGXT2Q9BYV1 514 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 NR2E3Q9Y5X4 410 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 PLXNA1Q9UIW2 1896 aa18.66■□□□□ 0.58
CD28-203ENST00000458610 HTTP42858 3142 aa18.65■□□□□ 0.58
CD28-203ENST00000458610 MYCNP04198 464 aaPredicted RBP18.65■□□□□ 0.58
CD28-203ENST00000458610 HSD17B4P51659 736 aa18.65■□□□□ 0.58
CD28-203ENST00000458610 APOBRQ0VD83 1088 aa18.65■□□□□ 0.58
CD28-203ENST00000458610 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
CD28-203ENST00000458610 TBC1D5Q92609 795 aa18.65■□□□□ 0.58
CD28-203ENST00000458610 PURBQ96QR8 312 aaKnown RBP18.65■□□□□ 0.58
CD28-203ENST00000458610 PDRG1Q9NUG6 133 aa18.65■□□□□ 0.58
CD28-203ENST00000458610 MNX1P50219 401 aaPredicted RBP18.64■□□□□ 0.57
CD28-203ENST00000458610 EVCP57679 992 aa18.64■□□□□ 0.57
CD28-203ENST00000458610 LRRC41Q15345 812 aa18.64■□□□□ 0.57
CD28-203ENST00000458610 GJC2Q5T442 439 aaPredicted RBP18.64■□□□□ 0.57
CD28-203ENST00000458610 TEX2Q8IWB9 1127 aa18.64■□□□□ 0.57
CD28-203ENST00000458610 CMTR1Q8N1G2 835 aaKnown RBP18.64■□□□□ 0.57
CD28-203ENST00000458610 DIS3LQ8TF46 1054 aaKnown RBP18.64■□□□□ 0.57
CD28-203ENST00000458610 TAAR1Q96RJ0 339 aa18.64■□□□□ 0.57
CD28-203ENST00000458610 TSEN34Q9BSV6 310 aaKnown RBP18.64■□□□□ 0.57
CD28-203ENST00000458610 KATNBL1Q9H079 304 aa18.64■□□□□ 0.57
CD28-203ENST00000458610 RBM27Q9P2N5 1060 aaKnown RBP18.64■□□□□ 0.57
CD28-203ENST00000458610 Q9Y3F1 56 aa18.64■□□□□ 0.57
CD28-203ENST00000458610 hCG_1984214I3L0E3 225 aa18.63■□□□□ 0.57
CD28-203ENST00000458610 COL6A1P12109 1028 aa18.63■□□□□ 0.57
CD28-203ENST00000458610 EDNRBP24530 442 aa18.63■□□□□ 0.57
CD28-203ENST00000458610 STXBP2Q15833 593 aa18.63■□□□□ 0.57
CD28-203ENST00000458610 EEPD1Q7L9B9 569 aa18.63■□□□□ 0.57
CD28-203ENST00000458610 ZNF713Q8N859 430 aaPredicted RBP18.63■□□□□ 0.57
CD28-203ENST00000458610 PCSK9Q8NBP7 692 aaKnown RBP18.63■□□□□ 0.57
CD28-203ENST00000458610 SENP6Q9GZR1 1112 aaPredicted RBP18.63■□□□□ 0.57
CD28-203ENST00000458610 AP5M1Q9H0R1 490 aa18.63■□□□□ 0.57
CD28-203ENST00000458610 ASTN1O14525 1302 aa18.63■□□□□ 0.57
CD28-203ENST00000458610 EVI5O60447 810 aa18.62■□□□□ 0.57
CD28-203ENST00000458610 PGK1P00558 417 aa18.62■□□□□ 0.57
CD28-203ENST00000458610 ADCYAP1R1P41586 468 aa18.62■□□□□ 0.57
CD28-203ENST00000458610 AKAP17AQ02040 695 aaKnown RBP18.62■□□□□ 0.57
CD28-203ENST00000458610 ANKRD1Q15327 319 aa18.62■□□□□ 0.57
CD28-203ENST00000458610 TAPT1Q6NXT6 567 aa18.62■□□□□ 0.57
CD28-203ENST00000458610 FBXO16Q8IX29 292 aaPredicted RBP18.62■□□□□ 0.57
CD28-203ENST00000458610 SMARCC2Q8TAQ2 1214 aa18.62■□□□□ 0.57
CD28-203ENST00000458610 SCFD2Q8WU76 684 aa18.62■□□□□ 0.57
CD28-203ENST00000458610 ZNF274Q96GC6 653 aaPredicted RBP18.62■□□□□ 0.57
CD28-203ENST00000458610 UPF3BQ9BZI7 483 aaKnown RBP18.62■□□□□ 0.57
CD28-203ENST00000458610 ALDH8A1Q9H2A2 487 aaPredicted RBP18.62■□□□□ 0.57
CD28-203ENST00000458610 PSTPIP2Q9H939 334 aa18.62■□□□□ 0.57
CD28-203ENST00000458610 V9GY48 417 aaPredicted RBP18.62■□□□□ 0.57
CD28-203ENST00000458610 RBM47A0AV96 593 aaKnown RBP18.61■□□□□ 0.57
CD28-203ENST00000458610 OPLAHO14841 1288 aa18.61■□□□□ 0.57
CD28-203ENST00000458610 NKRFO15226 690 aaKnown RBP eCLIP18.61■□□□□ 0.57
CD28-203ENST00000458610 ZEB2O60315 1214 aa18.61■□□□□ 0.57
CD28-203ENST00000458610 EIF3JO75822 258 aaKnown RBP18.61■□□□□ 0.57
CD28-203ENST00000458610 NR3C2P08235 984 aa18.61■□□□□ 0.57
CD28-203ENST00000458610 GJA9P57773 515 aa18.61■□□□□ 0.57
CD28-203ENST00000458610 CPLX2Q6PUV4 134 aaKnown RBP18.61■□□□□ 0.57
CD28-203ENST00000458610 WDR11Q9BZH6 1224 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms