RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 CWC22Q9HCG8 908 aaKnown RBP19.36■□□□□ 0.69
TRIM39-211ENST00000458516 RIC8AQ9NPQ8 531 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 KCNJ14Q9UNX9 436 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 KIF3AQ9Y496 699 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 IVNS1ABPQ9Y6Y0 642 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 LRRC37A2A6NM11 1700 aa19.36■□□□□ 0.69
TRIM39-211ENST00000458516 MYH7BA7E2Y1 1941 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 SLC15A5A6NIM6 579 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 MEIS2O14770 477 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 TNPO2O14787 897 aaKnown RBP19.35■□□□□ 0.69
TRIM39-211ENST00000458516 STRNO43815 780 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 CFBP00751 764 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 NLRP5P59047 1200 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 RPS6P62753 249 aaKnown RBP19.35■□□□□ 0.69
TRIM39-211ENST00000458516 BAATQ14032 418 aaPredicted RBP19.35■□□□□ 0.69
TRIM39-211ENST00000458516 KCTD2Q14681 263 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 KIF22Q14807 665 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 MORN1Q5T089 497 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 KRT40Q6A162 431 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 RNF207Q6ZRF8 634 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 ANKRD35Q8N283 1001 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 SAMD3Q8N6K7 520 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 DAGLBQ8NCG7 672 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 CUL5Q93034 780 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 C6orf50Q9HD87 102 aa19.35■□□□□ 0.69
TRIM39-211ENST00000458516 DNAJC25-GNG10A0A024R161 153 aa19.34■□□□□ 0.69
TRIM39-211ENST00000458516 GCOM1H8Y6P7 765 aaPredicted RBP19.34■□□□□ 0.69
TRIM39-211ENST00000458516 PIK3CDO00329 1044 aa19.34■□□□□ 0.69
TRIM39-211ENST00000458516 POLR2MP0CAP2 368 aa19.34■□□□□ 0.69
TRIM39-211ENST00000458516 ADORA2AP29274 412 aa19.34■□□□□ 0.69
TRIM39-211ENST00000458516 HOXA13P31271 388 aaPredicted RBP19.34■□□□□ 0.69
TRIM39-211ENST00000458516 GUCY1B3Q02153 619 aa19.34■□□□□ 0.69
TRIM39-211ENST00000458516 UBE2SQ16763 222 aa19.34■□□□□ 0.69
TRIM39-211ENST00000458516 USP17L6PQ6QN14 398 aa19.34■□□□□ 0.69
TRIM39-211ENST00000458516 SYTL5Q8TDW5 730 aaPredicted RBP19.34■□□□□ 0.69
TRIM39-211ENST00000458516 MAP3K20Q9NYL2 800 aaKnown RBP19.34■□□□□ 0.69
TRIM39-211ENST00000458516 COL20A1Q9P218 1284 aa19.34■□□□□ 0.69
TRIM39-211ENST00000458516 MMP1P03956 469 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 PGK2P07205 417 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 CALML3P27482 149 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 GNA11P29992 359 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 CLK2P49760 499 aaKnown RBP19.33■□□□□ 0.68
TRIM39-211ENST00000458516 MRPL12P52815 198 aaKnown RBP19.33■□□□□ 0.68
TRIM39-211ENST00000458516 TRIM29Q14134 588 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 TEX2Q8IWB9 1127 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 FBXO18Q8NFZ0 1043 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 USP6NLQ92738 828 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 GLT8D2Q9H1C3 349 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 GJD2Q9UKL4 321 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 PCDHA4Q9UN74 947 aa19.33■□□□□ 0.68
TRIM39-211ENST00000458516 M0R2N6 131 aa19.32■□□□□ 0.68
TRIM39-211ENST00000458516 COBLO75128 1261 aa19.32■□□□□ 0.68
TRIM39-211ENST00000458516 CTCFP49711 727 aaPredicted RBP19.32■□□□□ 0.68
TRIM39-211ENST00000458516 CNTN2Q02246 1040 aa19.32■□□□□ 0.68
TRIM39-211ENST00000458516 MAP2K5Q13163 448 aa19.32■□□□□ 0.68
TRIM39-211ENST00000458516 LARP1BQ659C4 914 aaKnown RBP19.32■□□□□ 0.68
TRIM39-211ENST00000458516 GALNT17Q6IS24 598 aa19.32■□□□□ 0.68
TRIM39-211ENST00000458516 FAM133AQ8N9E0 248 aa19.32■□□□□ 0.68
TRIM39-211ENST00000458516 SOCS4Q8WXH5 440 aa19.32■□□□□ 0.68
TRIM39-211ENST00000458516 FGD4Q96M96 766 aa19.32■□□□□ 0.68
TRIM39-211ENST00000458516 PURBQ96QR8 312 aaKnown RBP19.32■□□□□ 0.68
TRIM39-211ENST00000458516 ASTN1O14525 1302 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 POTEB2H3BUK9 544 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 ZNF792Q3KQV3 632 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 BLIDQ8IZY5 108 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 REXO1Q8N1G1 1221 aaKnown RBP19.31■□□□□ 0.68
TRIM39-211ENST00000458516 BICD2Q8TD16 824 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 RASGRP4Q8TDF6 673 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 OXER1Q8TDS5 423 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 NUDT12Q9BQG2 462 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 TMEM260Q9NX78 707 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 BIN2Q9UBW5 565 aaPredicted RBP19.31■□□□□ 0.68
TRIM39-211ENST00000458516 GABRQQ9UN88 632 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 MYH15Q9Y2K3 1946 aa19.31■□□□□ 0.68
TRIM39-211ENST00000458516 GNRH1P01148 92 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 PDCP20941 246 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 SYT1P21579 422 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 KRT2P35908 639 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 LBX1P52954 281 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 PRKCZQ05513 592 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 FCHSD1Q86WN1 690 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 DIS3L2Q8IYB7 885 aaKnown RBP19.3■□□□□ 0.68
TRIM39-211ENST00000458516 NPLOC4Q8TAT6 608 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 TAAR1Q96RJ0 339 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 SRRDQ9UH36 339 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 PCDHA6Q9UN73 950 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 PCDHA8Q9Y5H6 950 aa19.3■□□□□ 0.68
TRIM39-211ENST00000458516 FRMPD4Q14CM0 1322 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 RPTORQ8N122 1335 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 SOWAHBA6NEL2 793 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 HOXC6P09630 235 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 RGS2P41220 211 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 AP3B2Q13367 1082 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 JAKMIP3Q5VZ66 844 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 TNFRSF25Q93038 417 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 PGBD1Q96JS3 809 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 APBA2Q99767 749 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 ANO3Q9BYT9 981 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 BRMS1Q9HCU9 246 aa19.29■□□□□ 0.68
TRIM39-211ENST00000458516 KIAA1217Q5T5P2 1943 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms