RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 DNERQ8NFT8 737 aa20.65■□□□□ 0.9
COL13A1-206ENST00000456019 AP5M1Q9H0R1 490 aa20.65■□□□□ 0.9
COL13A1-206ENST00000456019 JMJD4Q9H9V9 463 aa20.65■□□□□ 0.9
COL13A1-206ENST00000456019 VAT1LQ9HCJ6 419 aa20.65■□□□□ 0.9
COL13A1-206ENST00000456019 PDGFCQ9NRA1 345 aa20.65■□□□□ 0.9
COL13A1-206ENST00000456019 Q9Y3F1 56 aa20.65■□□□□ 0.9
COL13A1-206ENST00000456019 B4DLN1 442 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 CTAGE5O15320 804 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 PQBP1O60828 265 aaKnown RBP20.64■□□□□ 0.89
COL13A1-206ENST00000456019 CLTBP09497 229 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 MRPL12P52815 198 aaKnown RBP20.64■□□□□ 0.89
COL13A1-206ENST00000456019 WTAPQ15007 396 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 QRICH1Q2TAL8 776 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 BMP2KLQ5H9B9 411 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 STOX1Q6ZVD7 989 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 ANKRD33Q7Z3H0 272 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 FBXO11Q86XK2 927 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 STAG2Q8N3U4 1231 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 TOX2Q96NM4 488 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 ESYT1Q9BSJ8 1104 aa20.64■□□□□ 0.89
COL13A1-206ENST00000456019 PALM3A6NDB9 673 aaPredicted RBP20.63■□□□□ 0.89
COL13A1-206ENST00000456019 KLRF2D3W0D1 207 aa20.63■□□□□ 0.89
COL13A1-206ENST00000456019 LRIT3Q3SXY7 679 aa20.63■□□□□ 0.89
COL13A1-206ENST00000456019 SH3RF1Q7Z6J0 888 aa20.63■□□□□ 0.89
COL13A1-206ENST00000456019 MCF2L2Q86YR7 1114 aa20.63■□□□□ 0.89
COL13A1-206ENST00000456019 VTI1AQ96AJ9 217 aa20.63■□□□□ 0.89
COL13A1-206ENST00000456019 LSG1Q9H089 658 aaKnown RBP20.63■□□□□ 0.89
COL13A1-206ENST00000456019 MAD2L2Q9UI95 211 aa20.63■□□□□ 0.89
COL13A1-206ENST00000456019 MRPL11Q9Y3B7 192 aaKnown RBP20.63■□□□□ 0.89
COL13A1-206ENST00000456019 MROH7Q68CQ1 1323 aa20.62■□□□□ 0.89
COL13A1-206ENST00000456019 TRIM43BA6NCK2 446 aa20.62■□□□□ 0.89
COL13A1-206ENST00000456019 DCDC2CA8MYV0 355 aa20.62■□□□□ 0.89
COL13A1-206ENST00000456019 SOX1O00570 391 aaPredicted RBP20.62■□□□□ 0.89
COL13A1-206ENST00000456019 DYNC1LI2O43237 492 aaPredicted RBP20.62■□□□□ 0.89
COL13A1-206ENST00000456019 ZEB2O60315 1214 aa20.62■□□□□ 0.89
COL13A1-206ENST00000456019 BEX3Q00994 111 aa20.62■□□□□ 0.89
COL13A1-206ENST00000456019 PDE4DQ08499 809 aa20.62■□□□□ 0.89
COL13A1-206ENST00000456019 GRM4Q14833 912 aa20.62■□□□□ 0.89
COL13A1-206ENST00000456019 FSCN1Q16658 493 aaKnown RBP20.62■□□□□ 0.89
COL13A1-206ENST00000456019 CHST3Q7LGC8 479 aa20.62■□□□□ 0.89
COL13A1-206ENST00000456019 MB21D2Q8IYB1 491 aaPredicted RBP20.62■□□□□ 0.89
COL13A1-206ENST00000456019 TRIM43Q96BQ3 446 aaPredicted RBP20.62■□□□□ 0.89
COL13A1-206ENST00000456019 LTBP2Q14767 1821 aa20.62■□□□□ 0.89
COL13A1-206ENST00000456019 A0A0U1RQG5 324 aaPredicted RBP20.61■□□□□ 0.89
COL13A1-206ENST00000456019 RBM47A0AV96 593 aaKnown RBP20.61■□□□□ 0.89
COL13A1-206ENST00000456019 CABYRO75952 493 aa20.61■□□□□ 0.89
COL13A1-206ENST00000456019 EDNRBP24530 442 aa20.61■□□□□ 0.89
COL13A1-206ENST00000456019 DUSP28Q4G0W2 176 aa20.61■□□□□ 0.89
COL13A1-206ENST00000456019 TMEM67Q5HYA8 995 aa20.61■□□□□ 0.89
COL13A1-206ENST00000456019 BADQ92934 168 aa20.61■□□□□ 0.89
COL13A1-206ENST00000456019 MTMR8Q96EF0 704 aa20.61■□□□□ 0.89
COL13A1-206ENST00000456019 AMNQ9BXJ7 453 aa20.61■□□□□ 0.89
COL13A1-206ENST00000456019 WDR11Q9BZH6 1224 aa20.61■□□□□ 0.89
COL13A1-206ENST00000456019 KIAA0355O15063 1070 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 CDK7P50613 346 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 ANTXR2P58335 489 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 CATIPQ7Z7H3 387 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 SKAP1Q86WV1 359 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 IGDCC4Q8TDY8 1250 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 LRCH3Q96II8 777 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 MTA3Q9BTC8 594 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 SENP2Q9HC62 589 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 ANO2Q9NQ90 1003 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 TMEM39AQ9NV64 488 aa20.6■□□□□ 0.89
COL13A1-206ENST00000456019 ARVCFO00192 962 aa20.59■□□□□ 0.89
COL13A1-206ENST00000456019 ZBTB5O15062 677 aa20.59■□□□□ 0.89
COL13A1-206ENST00000456019 FAAP100Q0VG06 881 aa20.59■□□□□ 0.89
COL13A1-206ENST00000456019 TROAPQ12815 778 aa20.59■□□□□ 0.89
COL13A1-206ENST00000456019 TMEM63BQ5T3F8 832 aa20.59■□□□□ 0.89
COL13A1-206ENST00000456019 CASC1Q6TDU7 716 aa20.59■□□□□ 0.89
COL13A1-206ENST00000456019 SYTL5Q8TDW5 730 aaPredicted RBP20.59■□□□□ 0.89
COL13A1-206ENST00000456019 TBC1D5Q92609 795 aa20.59■□□□□ 0.89
COL13A1-206ENST00000456019 SLC27A2O14975 620 aa20.58■□□□□ 0.89
COL13A1-206ENST00000456019 RAG1P15918 1043 aa20.58■□□□□ 0.89
COL13A1-206ENST00000456019 PTGS1P23219 599 aa20.58■□□□□ 0.89
COL13A1-206ENST00000456019 HOXD11P31277 338 aaPredicted RBP20.58■□□□□ 0.89
COL13A1-206ENST00000456019 TRAF1Q13077 416 aa20.58■□□□□ 0.89
COL13A1-206ENST00000456019 GPR153Q6NV75 609 aa20.58■□□□□ 0.89
COL13A1-206ENST00000456019 CXCL17Q6UXB2 119 aa20.58■□□□□ 0.89
COL13A1-206ENST00000456019 NSUN6Q8TEA1 469 aaKnown RBP20.58■□□□□ 0.89
COL13A1-206ENST00000456019 SCFD2Q8WU76 684 aa20.58■□□□□ 0.89
COL13A1-206ENST00000456019 TAAR1Q96RJ0 339 aa20.58■□□□□ 0.89
COL13A1-206ENST00000456019 RIOX1Q9H6W3 641 aa20.58■□□□□ 0.89
COL13A1-206ENST00000456019 NKRFO15226 690 aaKnown RBP eCLIP20.57■□□□□ 0.88
COL13A1-206ENST00000456019 MCM5P33992 734 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 PPP2R5BQ15173 497 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 NECTIN1Q15223 517 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 CREB3L3Q68CJ9 461 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 CCDC136Q96JN2 1154 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 IWS1Q96ST2 819 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 RMDN3Q96TC7 470 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 SEZ6LQ9BYH1 1024 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 LY9Q9HBG7 655 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 COL20A1Q9P218 1284 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 PCDHA1Q9Y5I3 950 aa20.57■□□□□ 0.88
COL13A1-206ENST00000456019 TLR3O15455 904 aaKnown RBP20.56■□□□□ 0.88
COL13A1-206ENST00000456019 PRC1O43663 620 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 PPP1R11O60927 126 aaPredicted RBP20.56■□□□□ 0.88
COL13A1-206ENST00000456019 CFBP00751 764 aa20.56■□□□□ 0.88
COL13A1-206ENST00000456019 ITGB8P26012 769 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms