RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 CCDC91Q7Z6B0 441 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TEX2Q8IWB9 1127 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 KLHL7Q8IXQ5 586 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 CPXCR1Q8N123 301 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 GSDMAQ96QA5 445 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 PLA2G12BQ9BX93 195 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TUBE1Q9UJT0 475 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 OR52Z1P0C646 297 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 SSR1P43307 286 aaKnown RBP12.43□□□□□ -0.42
DDR1-240ENST00000454612 MAGEA1P43355 309 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 CDR1P51861 262 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 PRR16Q569H4 304 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TAX1BP1Q86VP1 789 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TMTC1Q8IUR5 882 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 CCDC155Q8N6L0 562 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TAF4BQ92750 862 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 SH2D3AQ9BRG2 576 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 ATP8A2Q9NTI2 1148 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 AGPAT5Q9NUQ2 364 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TDP2O95551 362 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 LONRF2Q1L5Z9 754 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 CCDC174Q6PII3 467 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 NYAP1Q6ZVC0 841 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TMC4Q7Z404 712 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 VGLL2Q8N8G2 317 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 PCDHA4Q9UN74 947 aa12.43□□□□□ -0.42
DDR1-240ENST00000454612 TOGARAM1Q9Y4F4 1720 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 ABCC12Q96J65 1359 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
DDR1-240ENST00000454612 MAATS1Q7Z4T9 603 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 CEP112Q8N8E3 955 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 KIAA1024Q9UPX6 916 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 ZNF185O15231 689 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 FGFR2P21802 821 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 HOXA13P31271 388 aaPredicted RBP12.42□□□□□ -0.42
DDR1-240ENST00000454612 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.423e-6■□□□□ 9
DDR1-240ENST00000454612 NEK8Q86SG6 692 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 LAMA4Q16363 1823 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 ITGB4P16144 1822 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 CLRN2A0PK11 232 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 ONECUT3O60422 494 aaPredicted RBP12.42□□□□□ -0.42
DDR1-240ENST00000454612 SERPINB2P05120 415 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 GUCY2FP51841 1108 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 RASSF7Q02833 373 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 SYCP3Q8IZU3 236 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 ABCB6Q9NP58 842 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 DUSP10Q9Y6W6 482 aa12.42□□□□□ -0.42
DDR1-240ENST00000454612 ADCY7P51828 1080 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 ALX1Q15699 326 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 NAA35Q5VZE5 725 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 IFIH1Q9BYX4 1025 aaKnown RBP12.41□□□□□ -0.42
DDR1-240ENST00000454612 MYO6Q9UM54 1294 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 ADGRG1Q9Y653 693 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 MFAP3LO75121 409 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 C2orf54Q08AI8 447 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 STK4Q13043 487 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 PKN1Q16512 942 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 TCP11X2Q5H9J9 407 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 KCTD16Q68DU8 428 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 SND1Q7KZF4 910 aaKnown RBP eCLIP12.41□□□□□ -0.42
DDR1-240ENST00000454612 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.41□□□□□ -0.42
DDR1-240ENST00000454612 TJP1Q07157 1748 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 RIC1Q4ADV7 1423 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 EFCAB8A8MWE9 144 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 CLIC2O15247 247 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 TACC1O75410 805 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 ERCC5P28715 1186 aaPredicted RBP12.41□□□□□ -0.42
DDR1-240ENST00000454612 REXO1L1PQ8IX06 675 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 RIN2Q8WYP3 895 aaPredicted RBP12.41□□□□□ -0.42
DDR1-240ENST00000454612 RIOK1Q9BRS2 568 aaKnown RBP12.41□□□□□ -0.42
DDR1-240ENST00000454612 DISC1Q9NRI5 854 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 INTS13Q9NVM9 706 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 PCDHA12Q9UN75 941 aa12.41□□□□□ -0.42
DDR1-240ENST00000454612 POLR2FP61218 127 aaKnown RBP12.4□□□□□ -0.42
DDR1-240ENST00000454612 DPYDQ12882 1025 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 HPSEQ9Y251 543 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 SPDYE3A6NKU9 549 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 NCK2O43639 380 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 DDAH1O94760 285 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 MOCS3O95396 460 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 STAT3P40763 770 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 PHF20Q9BVI0 1012 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 PACSIN2Q9UNF0 486 aaPredicted RBP12.4□□□□□ -0.42
DDR1-240ENST00000454612 FAN1Q9Y2M0 1017 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 SAR1BQ9Y6B6 198 aa12.4□□□□□ -0.42
DDR1-240ENST00000454612 NPHP3-ACAD11A0A0J9YXS1 232 aa12.4□□□□□ -0.43
DDR1-240ENST00000454612 MAP2K2P36507 400 aa12.4□□□□□ -0.43
DDR1-240ENST00000454612 KRT83P78385 493 aa12.4□□□□□ -0.43
DDR1-240ENST00000454612 PFKFB3Q16875 520 aaPredicted RBP12.4□□□□□ -0.43
DDR1-240ENST00000454612 MLXIPQ9HAP2 919 aa12.4□□□□□ -0.43
DDR1-240ENST00000454612 EHD2Q9NZN4 543 aa12.4□□□□□ -0.43
DDR1-240ENST00000454612 CDC23Q9UJX2 597 aa12.4□□□□□ -0.43
DDR1-240ENST00000454612 TCP10L2B9ZVM9 353 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 HGSO14964 777 aaPredicted RBP12.39□□□□□ -0.43
DDR1-240ENST00000454612 ABCB4P21439 1286 aa12.39□□□□□ -0.43
DDR1-240ENST00000454612 PMS1P54277 932 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms