RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 ANKRD40Q6AI12 368 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 SV2BQ7L1I2 683 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 ADSSL1Q8N142 457 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 UHMK1Q8TAS1 419 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 TFCP2L1Q9NZI6 479 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 RICTORQ6R327 1708 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 POLR2FP61218 127 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 ALX1Q15699 326 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 KRT71Q3SY84 523 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 SLC9C1Q4G0N8 1177 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 TMTC3Q6ZXV5 915 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 DYDC1Q8WWB3 177 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 FAM212AQ96EL1 285 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 DPH5Q9H2P9 285 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 CD248Q9HCU0 757 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 EZRP15311 586 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 CCNE1P24864 410 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 MSL1Q68DK7 614 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 ELOA2Q8IYF1 753 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 TBC1D31Q96DN5 1066 aa15.34■□□□□ 0.05
UBE2D3-210ENST00000453744 OVOS2A0A0G2JMS6 1433 aa15.33■□□□□ 0.05
UBE2D3-210ENST00000453744 MROH5Q6ZUA9 1318 aa15.33■□□□□ 0.05
UBE2D3-210ENST00000453744 ANO9A1A5B4 782 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 LRRC53A6NM62 1247 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 CYP2D6P10635 497 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 CNNM4Q6P4Q7 775 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 EMBQ6PCB8 327 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 TSEN2Q8NCE0 465 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 THAP9Q9H5L6 903 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 CXorf56Q9H5V9 222 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 RGPD1P0DJD0 1748 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 ERVV-2B6SEH9 535 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 STK4Q13043 487 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 BANK1Q8NDB2 785 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 OR2W6PQ8NHA6 318 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 RNPC3Q96LT9 517 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 NWD1Q149M9 1564 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 NRXN3Q9Y4C0 1643 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 TMEM266Q2M3C6 531 aa15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 PAPD7Q5XG87 772 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-210ENST00000453744 CLNS1AP54105 237 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 NDST4Q9H3R1 872 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 PIK3C2AO00443 1686 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 KLHL30Q0D2K2 578 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 PKN1Q16512 942 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 WDR59Q6PJI9 974 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 TBC1D5Q92609 795 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 AP1M1Q9BXS5 423 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 TMEM60Q9H2L4 133 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 PLAAQ9Y263 795 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 PRPF6O94906 941 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 SLC1A4P43007 532 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 TNNI2P48788 182 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 ALS2CLQ60I27 953 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 CCDC84Q86UT8 332 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 PNMA1Q8ND90 353 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 LSM14BQ9BX40 385 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 BIN2Q9UBW5 565 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 ADAMTS1Q9UHI8 967 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 SAP30BPQ9UHR5 308 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 TACC3Q9Y6A5 838 aa15.32■□□□□ 0.04
UBE2D3-210ENST00000453744 AARSP49588 968 aaKnown RBP eCLIP15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 CHRNDQ07001 517 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 RPS6KA1Q15418 735 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 SFMBT2Q5VUG0 894 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 CCDC155Q8N6L0 562 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 MEFVO15553 781 aaPredicted RBP15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 RPS6KA5O75582 802 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 PALMO75781 387 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 KAT2BQ92831 832 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 DHTKD1Q96HY7 919 aaPredicted RBP15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 GOLPH3Q9H4A6 298 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 SRGNP10124 158 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 LSP1P33241 339 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 SPATA20Q8TB22 786 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 N4BP2L2Q92802 583 aaPredicted RBP15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 ODF2LQ9ULJ1 636 aa15.31■□□□□ 0.04
UBE2D3-210ENST00000453744 A0A1W2PQC6 194 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 CSF1RP07333 972 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 PDXDC2PQ6P474 469 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 SH3RF1Q7Z6J0 888 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 RETREG2Q8NC44 543 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 HDLBPQ00341 1268 aaKnown RBP15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 PPP1R7Q15435 360 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 ACSBG1Q96GR2 724 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 DNAJC7Q99615 494 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 NOVA2Q9UNW9 492 aaKnown RBP15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 AGPSO00116 658 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 VIMP08670 466 aaKnown RBP15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 TXNRD1Q16881 649 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 CCT8L2Q96SF2 557 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 CEP89Q96ST8 783 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 MTRQ99707 1265 aa15.3■□□□□ 0.04
UBE2D3-210ENST00000453744 DCAF17Q5H9S7 520 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 NLRP14Q86W24 1093 aa15.29■□□□□ 0.04
UBE2D3-210ENST00000453744 DDX42Q86XP3 938 aaKnown RBP eCLIP15.29■□□□□ 0.044e-7■■■□□ 18.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms