RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 RCSD1Q6JBY9 416 aa12.18□□□□□ -0.46
DDX39B-211ENST00000449757 DEFB128Q7Z7B8 93 aa12.18□□□□□ -0.46
DDX39B-211ENST00000449757 OR6J1Q8NGC5 347 aa12.18□□□□□ -0.46
DDX39B-211ENST00000449757 DCTPP1Q9H773 170 aa12.18□□□□□ -0.46
DDX39B-211ENST00000449757 TRMT13Q9NUP7 481 aaKnown RBP12.18□□□□□ -0.46
DDX39B-211ENST00000449757 COL4A4P53420 1690 aaPredicted RBP12.18□□□□□ -0.46
DDX39B-211ENST00000449757 CHD7Q9P2D1 2997 aa12.18□□□□□ -0.46
DDX39B-211ENST00000449757 GRIN2DO15399 1336 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 TNKSO95271 1327 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 FRMPD2Q68DX3 1309 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-211ENST00000449757 CYP2C9P11712 490 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 ATP2A2P16615 1042 aaKnown RBP12.17□□□□□ -0.46
DDX39B-211ENST00000449757 CALML3P27482 149 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 SLC16A2P36021 539 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-211ENST00000449757 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 NKX3-2P78367 333 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 RRP12Q5JTH9 1297 aaKnown RBP12.17□□□□□ -0.46
DDX39B-211ENST00000449757 ZMYM1Q5SVZ6 1142 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-211ENST00000449757 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 SEZ6LQ9BYH1 1024 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 WDR11Q9BZH6 1224 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 ALDH8A1Q9H2A2 487 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-211ENST00000449757 INCENPQ9NQS7 918 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 GPHNQ9NQX3 736 aaPredicted RBP12.17□□□□□ -0.46
DDX39B-211ENST00000449757 POLR3EQ9NVU0 708 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 ADD3Q9UEY8 706 aaKnown RBP12.17□□□□□ -0.46
DDX39B-211ENST00000449757 RAPGEFL1Q9UHV5 662 aa12.17□□□□□ -0.46
DDX39B-211ENST00000449757 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX39B-211ENST00000449757 RAD50Q92878 1312 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 PLA2G6O60733 806 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 ICAM1P05362 532 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 CPT1AP50416 773 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 BAATQ14032 418 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-211ENST00000449757 TTLL4Q14679 1199 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 DUSP28Q4G0W2 176 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 BRDTQ58F21 947 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-211ENST00000449757 SYDE2Q5VT97 1194 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 TTBK2Q6IQ55 1244 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 SLC30A10Q6XR72 485 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 PPP1R13LQ8WUF5 828 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 CERS4Q9HA82 394 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 GPCPD1Q9NPB8 672 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 IL17RBQ9NRM6 502 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
DDX39B-211ENST00000449757 Q9Y3F1 56 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 PCDHA11Q9Y5I1 949 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 BDP1A6H8Y1 2624 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 TET1Q8NFU7 2136 aa12.16□□□□□ -0.46
DDX39B-211ENST00000449757 NFIBO00712 420 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
DDX39B-211ENST00000449757 CA3P07451 260 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 PFKMP08237 780 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 SUPT20HL2P0C7V6 817 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 ACTN1P12814 892 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 MX1P20591 662 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 PDE4DQ08499 809 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 TMEM67Q5HYA8 995 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 NECAB3Q96P71 396 aaPredicted RBP12.15□□□□□ -0.46
DDX39B-211ENST00000449757 MPHOSPH6Q99547 160 aaKnown RBP12.15□□□□□ -0.46
DDX39B-211ENST00000449757 MTG1Q9BT17 334 aaPredicted RBP12.15□□□□□ -0.46
DDX39B-211ENST00000449757 FTOQ9C0B1 505 aaKnown RBP eCLIP12.15□□□□□ -0.46
DDX39B-211ENST00000449757 RANBP17Q9H2T7 1088 aaKnown RBP12.15□□□□□ -0.46
DDX39B-211ENST00000449757 NOD1Q9Y239 953 aa12.15□□□□□ -0.46
DDX39B-211ENST00000449757 KIAA1217Q5T5P2 1943 aa12.14□□□□□ -0.47
DDX39B-211ENST00000449757 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
DDX39B-211ENST00000449757 TFF2Q03403 129 aa12.14□□□□□ -0.47
DDX39B-211ENST00000449757 VPS53Q5VIR6 699 aa12.14□□□□□ -0.47
DDX39B-211ENST00000449757 RNF207Q6ZRF8 634 aa12.14□□□□□ -0.47
DDX39B-211ENST00000449757 RETREG2Q8NC44 543 aa12.14□□□□□ -0.47
DDX39B-211ENST00000449757 REV3LO60673 3130 aa12.14□□□□□ -0.47
DDX39B-211ENST00000449757 RFXAPO00287 272 aa12.13□□□□□ -0.47
DDX39B-211ENST00000449757 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
DDX39B-211ENST00000449757 NBPF20Q3BBV1 942 aa12.13□□□□□ -0.47
DDX39B-211ENST00000449757 MORC4Q8TE76 937 aa12.13□□□□□ -0.47
DDX39B-211ENST00000449757 COPS5Q92905 334 aa12.13□□□□□ -0.47
DDX39B-211ENST00000449757 SLC9A7Q96T83 725 aa12.13□□□□□ -0.47
DDX39B-211ENST00000449757 LAMA4Q16363 1823 aa12.13□□□□□ -0.47
DDX39B-211ENST00000449757 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
DDX39B-211ENST00000449757 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 XIRP2A4UGR9 3374 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 FOXP2O15409 715 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 ORC4O43929 436 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 KCNJ6P48051 423 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 KCNQ1P51787 676 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 HAND2P61296 217 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 AAK1Q2M2I8 961 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 USH1GQ495M9 461 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 ARNTL2Q8WYA1 636 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 TMEM47Q9BQJ4 181 aa12.12□□□□□ -0.47
DDX39B-211ENST00000449757 TRANK1O15050 2925 aa12.11□□□□□ -0.47
DDX39B-211ENST00000449757 KIF28PB7ZC32 967 aa12.11□□□□□ -0.47
DDX39B-211ENST00000449757 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
DDX39B-211ENST00000449757 RFC2P35250 354 aa12.11□□□□□ -0.47
DDX39B-211ENST00000449757 RPS6P62753 249 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms