RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 PGRP06401 933 aa7.83□□□□□ -1.16
USP49-205ENST00000448078 HOXA10P31260 410 aaPredicted RBP7.83□□□□□ -1.16
USP49-205ENST00000448078 CDK8P49336 464 aa7.83□□□□□ -1.16
USP49-205ENST00000448078 CAMK2GQ13555 558 aaPredicted RBP7.83□□□□□ -1.16
USP49-205ENST00000448078 STYK1Q6J9G0 422 aa7.83□□□□□ -1.16
USP49-205ENST00000448078 PHC3Q8NDX5 983 aa7.83□□□□□ -1.16
USP49-205ENST00000448078 XAGE3Q8WTP9 111 aa7.83□□□□□ -1.16
USP49-205ENST00000448078 MASTLQ96GX5 879 aa7.83□□□□□ -1.16
USP49-205ENST00000448078 CAPNS2Q96L46 248 aa7.83□□□□□ -1.16
USP49-205ENST00000448078 TMEM74Q96NL1 305 aa7.83□□□□□ -1.16
USP49-205ENST00000448078 TMX4Q9H1E5 349 aaPredicted RBP7.83□□□□□ -1.16
USP49-205ENST00000448078 TPX2Q9ULW0 747 aaKnown RBP7.83□□□□□ -1.16
USP49-205ENST00000448078 KIF13BQ9NQT8 1826 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 ARFGEF1Q9Y6D6 1849 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 LEFTY1O75610 366 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 ITIH2P19823 946 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 CANXP27824 592 aaKnown RBP7.82□□□□□ -1.16
USP49-205ENST00000448078 EIF6P56537 245 aaKnown RBP7.82□□□□□ -1.16
USP49-205ENST00000448078 CHMP4BP1P59074 171 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 CCDC93Q567U6 631 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 ARMCX6Q7L4S7 300 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 HID1Q8IV36 788 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 TTC5Q8N0Z6 440 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 GOLM1Q8NBJ4 401 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 GCC1Q96CN9 775 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
USP49-205ENST00000448078 CYP19A1P11511 503 aaPredicted RBP7.81□□□□□ -1.16
USP49-205ENST00000448078 ALDH1B1P30837 517 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 CD97P48960 835 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 RPL6Q02878 288 aaKnown RBP7.81□□□□□ -1.16
USP49-205ENST00000448078 EIF4A2Q14240 407 aaKnown RBP7.81□□□□□ -1.16
USP49-205ENST00000448078 BNC2Q6ZN30 1099 aaPredicted RBP7.81□□□□□ -1.16
USP49-205ENST00000448078 DNAJC10Q8IXB1 793 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 GPC2Q8N158 579 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 FAM181AQ8N9Y4 354 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 CNBD1Q8NA66 436 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 TESK2Q96S53 571 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 MIPEPQ99797 713 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 DUSP23Q9BVJ7 150 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 WNT10AQ9GZT5 417 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 DDX21Q9NR30 783 aaKnown RBP eCLIP7.81□□□□□ -1.16
USP49-205ENST00000448078 CACNA2D2Q9NY47 1150 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 POLKQ9UBT6 870 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 GTF2IRD1Q9UHL9 959 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 KDRP35968 1356 aa7.81□□□□□ -1.16
USP49-205ENST00000448078 SOS1Q07889 1333 aaPredicted RBP7.8□□□□□ -1.16
USP49-205ENST00000448078 GNAT3A8MTJ3 354 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 WNT11O96014 354 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 TNNT2P45379 298 aaPredicted RBP7.8□□□□□ -1.16
USP49-205ENST00000448078 LMNB2Q03252 620 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 SEZ6L2Q6UXD5 910 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 CYFIP1Q7L576 1253 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 GATA6Q92908 595 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 RSRP1Q9BUV0 290 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 FOXQ1Q9C009 403 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 MCOLN1Q9GZU1 580 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 PKD1L3Q7Z443 1732 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 ITGB4P16144 1822 aa7.8□□□□□ -1.16
USP49-205ENST00000448078 TLR3O15455 904 aaKnown RBP7.79□□□□□ -1.16
USP49-205ENST00000448078 LRIG2O94898 1065 aa7.79□□□□□ -1.16
USP49-205ENST00000448078 NPR1P16066 1061 aa7.79□□□□□ -1.16
USP49-205ENST00000448078 PLCG1P19174 1290 aa7.79□□□□□ -1.16
USP49-205ENST00000448078 ZNF76P36508 570 aa7.79□□□□□ -1.16
USP49-205ENST00000448078 USP50Q70EL3 339 aaPredicted RBP7.79□□□□□ -1.16
USP49-205ENST00000448078 UBE3DQ7Z6J8 389 aa7.79□□□□□ -1.16
USP49-205ENST00000448078 NBPF5PQ86XG9 351 aaPredicted RBP7.79□□□□□ -1.16
USP49-205ENST00000448078 TP53INP2Q8IXH6 220 aa7.79□□□□□ -1.16
USP49-205ENST00000448078 SLC52A2Q9HAB3 445 aa7.79□□□□□ -1.16
USP49-205ENST00000448078 COPRSQ9NQ92 184 aa7.79□□□□□ -1.16
USP49-205ENST00000448078 BSDC1Q9NW68 430 aaPredicted RBP7.79□□□□□ -1.16
USP49-205ENST00000448078 ZNF652Q9Y2D9 606 aa7.79□□□□□ -1.16
USP49-205ENST00000448078 MED26O95402 600 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 F13A1P00488 732 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 SRGNP10124 158 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 MRPL58Q14197 206 aaKnown RBP7.78□□□□□ -1.16
USP49-205ENST00000448078 CYP4F22Q6NT55 531 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 FLCNQ8NFG4 579 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 GATAD2BQ8WXI9 593 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 HHIPL1Q96JK4 782 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 DPH2Q9BQC3 489 aaPredicted RBP7.78□□□□□ -1.16
USP49-205ENST00000448078 FBRSQ9HAH7 460 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 PRDM5Q9NQX1 630 aaPredicted RBP7.78□□□□□ -1.16
USP49-205ENST00000448078 ZC3H7BQ9UGR2 993 aaKnown RBP7.78□□□□□ -1.16
USP49-205ENST00000448078 SUPT16HQ9Y5B9 1047 aaKnown RBP7.78□□□□□ -1.16
USP49-205ENST00000448078 COL15A1P39059 1388 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 CARMIL3Q8ND23 1372 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 RGPD2P0DJD1 1756 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 SBF1O95248 1867 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 TOGARAM1Q9Y4F4 1720 aa7.78□□□□□ -1.16
USP49-205ENST00000448078 RBM47A0AV96 593 aaKnown RBP7.77□□□□□ -1.17
USP49-205ENST00000448078 FAM155AB1AL88 458 aaPredicted RBP7.77□□□□□ -1.17
USP49-205ENST00000448078 MCM4P33991 863 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 EIF4A3P38919 411 aaKnown RBP7.77□□□□□ -1.17
USP49-205ENST00000448078 TNNI2P48788 182 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 EIF5P55010 431 aaKnown RBP7.77□□□□□ -1.17
USP49-205ENST00000448078 NOGQ13253 232 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 CWF19L2Q2TBE0 894 aaKnown RBP7.77□□□□□ -1.17
USP49-205ENST00000448078 PRAMEF13Q5VWM6 474 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 TBC1D9BQ66K14 1250 aa7.77□□□□□ -1.17
USP49-205ENST00000448078 SULT6B1Q6IMI4 303 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms