RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 NOL7Q9UMY1 257 aaKnown RBP22.33■■□□□ 1.16
SGCE-207ENST00000447873 TM4SF4P48230 202 aa22.32■■□□□ 1.16
SGCE-207ENST00000447873 KRT85P78386 507 aa22.32■■□□□ 1.16
SGCE-207ENST00000447873 NONOQ15233 471 aaKnown RBP eCLIP22.32■■□□□ 1.16
SGCE-207ENST00000447873 TAF1CQ15572 869 aaPredicted RBP22.32■■□□□ 1.16
SGCE-207ENST00000447873 CLEC17AQ6ZS10 378 aa22.32■■□□□ 1.16
SGCE-207ENST00000447873 ANKRD13CQ8N6S4 541 aa22.32■■□□□ 1.16
SGCE-207ENST00000447873 CHST13Q8NET6 341 aa22.32■■□□□ 1.16
SGCE-207ENST00000447873 CFAP45Q9UL16 551 aa22.32■■□□□ 1.16
SGCE-207ENST00000447873 SPDYE3A6NKU9 549 aa22.31■■□□□ 1.16
SGCE-207ENST00000447873 FOSP01100 380 aaPredicted RBP22.31■■□□□ 1.16
SGCE-207ENST00000447873 ERVK-9P63128 1117 aa22.31■■□□□ 1.16
SGCE-207ENST00000447873 ERVK-24P63145 666 aa22.31■■□□□ 1.16
SGCE-207ENST00000447873 AP3B2Q13367 1082 aa22.31■■□□□ 1.16
SGCE-207ENST00000447873 ATL3Q6DD88 541 aa22.31■■□□□ 1.16
SGCE-207ENST00000447873 NCAPG2Q86XI2 1143 aa22.31■■□□□ 1.16
SGCE-207ENST00000447873 SAMD3Q8N6K7 520 aa22.31■■□□□ 1.16
SGCE-207ENST00000447873 GPRC5AQ8NFJ5 357 aa22.31■■□□□ 1.16
SGCE-207ENST00000447873 MOV10L1Q9BXT6 1211 aaKnown RBP22.31■■□□□ 1.16
SGCE-207ENST00000447873 TFIP11Q9UBB9 837 aaKnown RBP22.31■■□□□ 1.16
SGCE-207ENST00000447873 AOC2O75106 756 aa22.3■■□□□ 1.16
SGCE-207ENST00000447873 SLC25A27O95847 323 aa22.3■■□□□ 1.16
SGCE-207ENST00000447873 COPB2P35606 906 aa22.3■■□□□ 1.16
SGCE-207ENST00000447873 Q3C1V9 767 aa22.3■■□□□ 1.16
SGCE-207ENST00000447873 NSMFQ6X4W1 530 aa22.3■■□□□ 1.16
SGCE-207ENST00000447873 FCHSD1Q86WN1 690 aa22.3■■□□□ 1.16
SGCE-207ENST00000447873 PGBD1Q96JS3 809 aa22.3■■□□□ 1.16
SGCE-207ENST00000447873 MAP3K20Q9NYL2 800 aaKnown RBP22.3■■□□□ 1.16
SGCE-207ENST00000447873 FBXO40Q9UH90 709 aa22.3■■□□□ 1.16
SGCE-207ENST00000447873 ATP2B1P20020 1258 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 HSD17B4P51659 736 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 GHRHRQ02643 423 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 INF2Q27J81 1249 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 RNF207Q6ZRF8 634 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 REM2Q8IYK8 340 aaPredicted RBP22.29■■□□□ 1.16
SGCE-207ENST00000447873 CNPY2Q9Y2B0 182 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 ERCC3P19447 782 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 TRAPPC10P48553 1259 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 TOB1P50616 345 aaPredicted RBP22.29■■□□□ 1.16
SGCE-207ENST00000447873 CCNA1P78396 465 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 CEBPZQ03701 1054 aaKnown RBP22.29■■□□□ 1.16
SGCE-207ENST00000447873 TBCKQ8TEA7 893 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 USP28Q96RU2 1077 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 ANO3Q9BYT9 981 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 MORF4L1Q9UBU8 362 aa22.29■■□□□ 1.16
SGCE-207ENST00000447873 RPS6P62753 249 aaKnown RBP22.28■■□□□ 1.16
SGCE-207ENST00000447873 HTRA3P83110 453 aa22.28■■□□□ 1.16
SGCE-207ENST00000447873 MAF1Q9H063 256 aa22.28■■□□□ 1.16
SGCE-207ENST00000447873 ZFYVE28Q9HCC9 887 aa22.28■■□□□ 1.16
SGCE-207ENST00000447873 MYH7BA7E2Y1 1941 aa22.27■■□□□ 1.16
SGCE-207ENST00000447873 FIBPO43427 364 aa22.27■■□□□ 1.16
SGCE-207ENST00000447873 ALDH1A1P00352 501 aa22.27■■□□□ 1.16
SGCE-207ENST00000447873 BAATQ14032 418 aaPredicted RBP22.27■■□□□ 1.16
SGCE-207ENST00000447873 FAM110CQ1W6H9 321 aa22.27■■□□□ 1.16
SGCE-207ENST00000447873 ANO1Q5XXA6 986 aa22.27■■□□□ 1.16
SGCE-207ENST00000447873 NEK8Q86SG6 692 aa22.27■■□□□ 1.16
SGCE-207ENST00000447873 FTOQ9C0B1 505 aaKnown RBP eCLIP22.27■■□□□ 1.16
SGCE-207ENST00000447873 SCAND2PQ9GZW5 306 aaPredicted RBP22.27■■□□□ 1.16
SGCE-207ENST00000447873 MROH8Q9H579 483 aa22.27■■□□□ 1.16
SGCE-207ENST00000447873 POLR3EQ9NVU0 708 aa22.27■■□□□ 1.16
SGCE-207ENST00000447873 NBR1Q14596 966 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 TTC38Q5R3I4 469 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 SLC30A10Q6XR72 485 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 CCAR1Q8IX12 1150 aaKnown RBP22.26■■□□□ 1.15
SGCE-207ENST00000447873 ANKRD35Q8N283 1001 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 SHCBP1Q8NEM2 672 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 SYTL5Q8TDW5 730 aaPredicted RBP22.26■■□□□ 1.15
SGCE-207ENST00000447873 EHMT1Q9H9B1 1298 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 A1CFQ9NQ94 594 aaKnown RBP22.26■■□□□ 1.15
SGCE-207ENST00000447873 RTEL1Q9NZ71 1219 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 CPA4Q9UI42 421 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 PCDHB6Q9Y5E3 794 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 CLIC4Q9Y696 253 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 ADGRA2Q96PE1 1338 aa22.26■■□□□ 1.15
SGCE-207ENST00000447873 GOLGA6L22H0YM25 854 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 TLR2O60603 784 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 SF3A1Q15459 793 aaKnown RBP22.25■■□□□ 1.15
SGCE-207ENST00000447873 WDR78Q5VTH9 848 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 SPATA32Q96LK8 384 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 GDPD2Q9HCC8 539 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 CYP39A1Q9NYL5 469 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 MAP2K2P36507 400 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 VEGFBP49765 207 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 LETM2Q2VYF4 491 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 COL20A1Q9P218 1284 aa22.25■■□□□ 1.15
SGCE-207ENST00000447873 PFASO15067 1338 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 CA12O43570 354 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 SREBF1P36956 1147 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 NASPP49321 788 aaPredicted RBP22.24■■□□□ 1.15
SGCE-207ENST00000447873 CRHR2Q13324 411 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 STK38Q15208 465 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 ZNF174Q15697 407 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 CSPP1Q1MSJ5 1256 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 PORCNQ9H237 461 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 EFCC1Q9HA90 598 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 CEP131Q9UPN4 1083 aa22.24■■□□□ 1.15
SGCE-207ENST00000447873 WNT7AO00755 349 aa22.23■■□□□ 1.15
SGCE-207ENST00000447873 CCNT1O60563 726 aaKnown RBP22.23■■□□□ 1.15
SGCE-207ENST00000447873 USP11P51784 963 aa22.23■■□□□ 1.15
SGCE-207ENST00000447873 ARHGAP4P98171 946 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms