RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 C16orf86Q6ZW13 317 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 KCNK18Q7Z418 384 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 MMS19Q96T76 1030 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 PYM1Q9BRP8 204 aaKnown RBP10.55□□□□□ -0.72
KLHL3-202ENST00000447439 NOC4LQ9BVI4 516 aaKnown RBP10.55□□□□□ -0.72
KLHL3-202ENST00000447439 CCSER1Q9C0I3 900 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 FAM207AQ9NSI2 230 aaPredicted RBP10.55□□□□□ -0.72
KLHL3-202ENST00000447439 MYO6Q9UM54 1294 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 LEMD3Q9Y2U8 911 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 CTAGE15A4D2H0 777 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 ZBTB22O15209 634 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 EDIL3O43854 480 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 CTAGE8P0CG41 777 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 TNNI2P48788 182 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 SCNN1DP51172 638 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 RC3H1Q5TC82 1133 aaKnown RBP10.55□□□□□ -0.72
KLHL3-202ENST00000447439 DPP8Q6V1X1 898 aaPredicted RBP10.55□□□□□ -0.72
KLHL3-202ENST00000447439 KIAA1328Q86T90 577 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 CTAGE6Q86UF2 777 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 CTAGE4Q8IX94 777 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 CEP112Q8N8E3 955 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 DAGLBQ8NCG7 672 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 ZFP91Q96JP5 570 aaPredicted RBP10.55□□□□□ -0.72
KLHL3-202ENST00000447439 PSMB7Q99436 277 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 KANSL2Q9H9L4 492 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 C6orf50Q9HD87 102 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 TBC1D7Q9P0N9 293 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 ROBO3Q96MS0 1386 aa10.55□□□□□ -0.72
KLHL3-202ENST00000447439 MYMKA6NI61 221 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 FAM196BA6NMK8 535 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 PPP4CP60510 307 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 AMPD2Q01433 879 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
KLHL3-202ENST00000447439 RAD51AP2Q09MP3 1159 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 GRB10Q13322 594 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 KCNB1Q14721 858 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 MIIPQ5JXC2 388 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 BEND6Q5SZJ8 279 aaPredicted RBP10.54□□□□□ -0.72
KLHL3-202ENST00000447439 REXO1Q8N1G1 1221 aaKnown RBP10.54□□□□□ -0.72
KLHL3-202ENST00000447439 NEDD1Q8NHV4 660 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 THAP9Q9H5L6 903 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 NHEJ1Q9H9Q4 299 aaPredicted RBP10.54□□□□□ -0.72
KLHL3-202ENST00000447439 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.54□□□□□ -0.72
KLHL3-202ENST00000447439 CAPN11Q9UMQ6 739 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 SRGNP10124 158 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 EEF1GP26641 437 aaKnown RBP10.54□□□□□ -0.72
KLHL3-202ENST00000447439 CYP2C19P33261 490 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 APBA1Q02410 837 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 ECM1Q16610 540 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 KRT25Q7Z3Z0 450 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 JAKMIP2Q96AA8 810 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 PNMA5Q96PV4 448 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 DNAJC7Q99615 494 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 UBXN6Q9BZV1 441 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 DDX4Q9NQI0 724 aaKnown RBP10.54□□□□□ -0.72
KLHL3-202ENST00000447439 BLOC1S4Q9NUP1 217 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 SMARCAL1Q9NZC9 954 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 GGA1Q9UJY5 639 aa10.54□□□□□ -0.72
KLHL3-202ENST00000447439 GPR75-ASB3A0A0A6YYF3 556 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 CCDC151A5D8V7 595 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 ZNF263O14978 683 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 SSBP05455 408 aaKnown RBP eCLIP10.53□□□□□ -0.72
KLHL3-202ENST00000447439 LDHCP07864 332 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 PDHBP11177 359 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 TAL1P17542 331 aaPredicted RBP10.53□□□□□ -0.72
KLHL3-202ENST00000447439 TRIM14Q14142 442 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 VPS72Q15906 364 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 CALCRLQ16602 461 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
KLHL3-202ENST00000447439 TMED8Q6PL24 325 aaPredicted RBP10.53□□□□□ -0.72
KLHL3-202ENST00000447439 ANKRD13CQ8N6S4 541 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 SPZ1Q9BXG8 430 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 LRWD1Q9UFC0 647 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 PPP1R11O60927 126 aaPredicted RBP10.53□□□□□ -0.72
KLHL3-202ENST00000447439 CCNE1P24864 410 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 CACNB3P54284 484 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 SNAP25P60880 206 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 DOK7Q18PE1 504 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 KCTD1Q719H9 257 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 FGFBP2Q9BYJ0 223 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 TTYH3Q9C0H2 523 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 MLXIPQ9HAP2 919 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 VPS18Q9P253 973 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 USP21Q9UK80 565 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 DAGLAQ9Y4D2 1042 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 PCDHAC2Q9Y5I4 1007 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 SBF2Q86WG5 1849 aa10.53□□□□□ -0.72
KLHL3-202ENST00000447439 MPHOSPH10O00566 681 aaKnown RBP10.52□□□□□ -0.72
KLHL3-202ENST00000447439 DNM2P50570 870 aa10.52□□□□□ -0.72
KLHL3-202ENST00000447439 KCTD19Q17RG1 926 aaPredicted RBP10.52□□□□□ -0.72
KLHL3-202ENST00000447439 TBC1D16Q8TBP0 767 aa10.52□□□□□ -0.72
KLHL3-202ENST00000447439 MMRN2Q9H8L6 949 aa10.52□□□□□ -0.72
KLHL3-202ENST00000447439 EHD2Q9NZN4 543 aa10.52□□□□□ -0.72
KLHL3-202ENST00000447439 DDX60LQ5H9U9 1706 aaKnown RBP10.52□□□□□ -0.72
KLHL3-202ENST00000447439 CCDC88AQ3V6T2 1871 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 NPHP3-ACAD11A0A0J9YXS1 232 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 LRRIQ3A6PVS8 624 aaPredicted RBP10.52□□□□□ -0.73
KLHL3-202ENST00000447439 PDE2AO00408 941 aaPredicted RBP10.52□□□□□ -0.73
KLHL3-202ENST00000447439 SERPINB2P05120 415 aa10.52□□□□□ -0.73
KLHL3-202ENST00000447439 GNA11P29992 359 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms