RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 STAG1Q8WVM7 1258 aa17.59■□□□□ 0.41
UBE2F-216ENST00000445676 ARNTL2Q8WYA1 636 aa17.59■□□□□ 0.41
UBE2F-216ENST00000445676 APPBP2Q92624 585 aa17.59■□□□□ 0.41
UBE2F-216ENST00000445676 GMCL1Q96IK5 515 aa17.59■□□□□ 0.41
UBE2F-216ENST00000445676 SLC9A7Q96T83 725 aa17.59■□□□□ 0.41
UBE2F-216ENST00000445676 C11orf16Q9NQ32 467 aa17.59■□□□□ 0.41
UBE2F-216ENST00000445676 SIP14410 1827 aa17.58■□□□□ 0.41
UBE2F-216ENST00000445676 M0R2C6 588 aa17.58■□□□□ 0.4
UBE2F-216ENST00000445676 SMARCA5O60264 1052 aaPredicted RBP17.58■□□□□ 0.4
UBE2F-216ENST00000445676 SUPT20HL2P0C7V6 817 aa17.58■□□□□ 0.4
UBE2F-216ENST00000445676 IKQ13123 557 aaPredicted RBP17.58■□□□□ 0.4
UBE2F-216ENST00000445676 DUSP28Q4G0W2 176 aa17.58■□□□□ 0.4
UBE2F-216ENST00000445676 KIAA1211Q6ZU35 1233 aa17.58■□□□□ 0.4
UBE2F-216ENST00000445676 KBTBD3Q8NAB2 608 aa17.58■□□□□ 0.4
UBE2F-216ENST00000445676 ZNF287Q9HBT7 754 aa17.58■□□□□ 0.4
UBE2F-216ENST00000445676 PLA2G6O60733 806 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 TSPY3P0CV98 308 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 TSPY8P0CW00 308 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 ACTN1P12814 892 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 MCCP23508 829 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 SLC1A4P43007 532 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 NSMFQ6X4W1 530 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 KCTD1Q719H9 257 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 PPP1R13LQ8WUF5 828 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
UBE2F-216ENST00000445676 FAM86C2PA6NEL3 165 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 LPXNO60711 386 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 MYL3P08590 195 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 RFC2P35250 354 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 GRB10Q13322 594 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 HERC6Q8IVU3 1022 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 PHOSPHO2Q8TCD6 241 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 HLA-CQ95604 372 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 LRRCC1Q9C099 1032 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 PRR12Q9ULL5 1215 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 DDX19BQ9UMR2 479 aa17.56■□□□□ 0.4
UBE2F-216ENST00000445676 RNF113AO15541 343 aaKnown RBP17.55■□□□□ 0.4
UBE2F-216ENST00000445676 IQCF3P0C7M6 154 aa17.55■□□□□ 0.4
UBE2F-216ENST00000445676 GNAT2P19087 354 aa17.55■□□□□ 0.4
UBE2F-216ENST00000445676 HNRNPUQ00839 825 aaKnown RBP eCLIP17.55■□□□□ 0.4
UBE2F-216ENST00000445676 TFAP4Q01664 338 aa17.55■□□□□ 0.4
UBE2F-216ENST00000445676 NBPF20Q3BBV1 942 aa17.55■□□□□ 0.4
UBE2F-216ENST00000445676 IFNL3Q8IZI9 196 aa17.55■□□□□ 0.4
UBE2F-216ENST00000445676 WDR11Q9BZH6 1224 aa17.55■□□□□ 0.4
UBE2F-216ENST00000445676 ECHDC1Q9NTX5 307 aa17.55■□□□□ 0.4
UBE2F-216ENST00000445676 CCPG1Q9ULG6 757 aa17.55■□□□□ 0.4
UBE2F-216ENST00000445676 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
UBE2F-216ENST00000445676 GPR37L1O60883 481 aa17.54■□□□□ 0.4
UBE2F-216ENST00000445676 APPP05067 770 aa17.54■□□□□ 0.4
UBE2F-216ENST00000445676 CPT1AP50416 773 aa17.54■□□□□ 0.4
UBE2F-216ENST00000445676 ALDH5A1P51649 535 aaPredicted RBP17.54■□□□□ 0.4
UBE2F-216ENST00000445676 FAM47CQ5HY64 1035 aa17.54■□□□□ 0.4
UBE2F-216ENST00000445676 TSHZ3Q63HK5 1081 aa17.54■□□□□ 0.4
UBE2F-216ENST00000445676 OR6J1Q8NGC5 347 aa17.54■□□□□ 0.4
UBE2F-216ENST00000445676 MTG1Q9BT17 334 aaPredicted RBP17.54■□□□□ 0.4
UBE2F-216ENST00000445676 CD320Q9NPF0 282 aa17.54■□□□□ 0.4
UBE2F-216ENST00000445676 KIAA1217Q5T5P2 1943 aa17.53■□□□□ 0.4
UBE2F-216ENST00000445676 RBM47A0AV96 593 aaKnown RBP17.53■□□□□ 0.4
UBE2F-216ENST00000445676 LCHNA4D1U4 455 aa17.53■□□□□ 0.4
UBE2F-216ENST00000445676 PATL2C9JE40 543 aaKnown RBP17.53■□□□□ 0.4
UBE2F-216ENST00000445676 PDE4BQ07343 736 aa17.53■□□□□ 0.4
UBE2F-216ENST00000445676 BAATQ14032 418 aaPredicted RBP17.53■□□□□ 0.4
UBE2F-216ENST00000445676 RCSD1Q6JBY9 416 aa17.53■□□□□ 0.4
UBE2F-216ENST00000445676 GDPD5Q8WTR4 605 aa17.53■□□□□ 0.4
UBE2F-216ENST00000445676 FTOQ9C0B1 505 aaKnown RBP eCLIP17.53■□□□□ 0.4
UBE2F-216ENST00000445676 KIF28PB7ZC32 967 aa17.52■□□□□ 0.4
UBE2F-216ENST00000445676 NFIBO00712 420 aa17.52■□□□□ 0.4
UBE2F-216ENST00000445676 ICAM1P05362 532 aa17.52■□□□□ 0.4
UBE2F-216ENST00000445676 ZFYP08048 801 aaPredicted RBP17.52■□□□□ 0.4
UBE2F-216ENST00000445676 MS4A1P11836 297 aa17.52■□□□□ 0.4
UBE2F-216ENST00000445676 PPARAQ07869 468 aa17.52■□□□□ 0.4
UBE2F-216ENST00000445676 NFRKBQ6P4R8 1299 aa17.52■□□□□ 0.4
UBE2F-216ENST00000445676 SEC62Q99442 399 aaKnown RBP17.52■□□□□ 0.4
UBE2F-216ENST00000445676 RANBP17Q9H2T7 1088 aaKnown RBP17.52■□□□□ 0.4
UBE2F-216ENST00000445676 IL17RBQ9NRM6 502 aa17.52■□□□□ 0.4
UBE2F-216ENST00000445676 STX8Q9UNK0 236 aa17.52■□□□□ 0.4
UBE2F-216ENST00000445676 MYO7AQ13402 2215 aa17.51■□□□□ 0.39
UBE2F-216ENST00000445676 NMT2O60551 498 aa17.51■□□□□ 0.39
UBE2F-216ENST00000445676 BAIAP3O94812 1187 aa17.51■□□□□ 0.39
UBE2F-216ENST00000445676 SLC30A10Q6XR72 485 aa17.51■□□□□ 0.39
UBE2F-216ENST00000445676 MICAL3Q7RTP6 2002 aa17.51■□□□□ 0.39
UBE2F-216ENST00000445676 TMCO2Q7Z6W1 182 aaPredicted RBP17.51■□□□□ 0.39
UBE2F-216ENST00000445676 RETREG2Q8NC44 543 aa17.51■□□□□ 0.39
UBE2F-216ENST00000445676 COPS5Q92905 334 aa17.51■□□□□ 0.39
UBE2F-216ENST00000445676 GPHNQ9NQX3 736 aaPredicted RBP17.51■□□□□ 0.39
UBE2F-216ENST00000445676 ADD3Q9UEY8 706 aaKnown RBP17.51■□□□□ 0.39
UBE2F-216ENST00000445676 MTMR7Q9Y216 660 aa17.51■□□□□ 0.39
UBE2F-216ENST00000445676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.51■□□□□ 0.39
UBE2F-216ENST00000445676 LOC102724159A0A0B4J2E5 919 aa17.5■□□□□ 0.39
UBE2F-216ENST00000445676 PI4K2BG5E9Z4 385 aa17.5■□□□□ 0.39
UBE2F-216ENST00000445676 WDR5P61964 334 aaKnown RBP17.5■□□□□ 0.39
UBE2F-216ENST00000445676 BFSP2Q13515 415 aa17.5■□□□□ 0.39
UBE2F-216ENST00000445676 PPP2R5BQ15173 497 aa17.5■□□□□ 0.39
UBE2F-216ENST00000445676 PWP2Q15269 919 aaKnown RBP17.5■□□□□ 0.39
UBE2F-216ENST00000445676 NACAP1Q9BZK3 213 aa17.5■□□□□ 0.39
UBE2F-216ENST00000445676 NAPBQ9H115 298 aa17.5■□□□□ 0.39
UBE2F-216ENST00000445676 MYH7BA7E2Y1 1941 aa17.5■□□□□ 0.39
UBE2F-216ENST00000445676 ZNF318Q5VUA4 2279 aa17.49■□□□□ 0.39
UBE2F-216ENST00000445676 PTPDC1A2A3K4 754 aa17.49■□□□□ 0.39
UBE2F-216ENST00000445676 A6NJR5 290 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms