RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 IRX5P78411 483 aaPredicted RBP19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 BEX3Q00994 111 aa19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 ITGA7Q13683 1181 aa19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 BRDTQ58F21 947 aaPredicted RBP19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 PSRC1Q6PGN9 363 aaPredicted RBP19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 CXCL17Q6UXB2 119 aa19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 FBXO16Q8IX29 292 aaPredicted RBP19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 CNNM2Q9H8M5 875 aa19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 MCM3APO60318 1980 aa19.13■□□□□ 0.65
CTDSP1-204ENST00000443891 NEDD4P46934 1319 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 RAD50Q92878 1312 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 EDNRBP24530 442 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 CPT1AP50416 773 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 PNMA1Q8ND90 353 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 EXOC6Q8TAG9 804 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 CDX2Q99626 313 aaPredicted RBP19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 WDR11Q9BZH6 1224 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 KRT23Q9C075 422 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 MTIF3Q9H2K0 278 aaKnown RBP19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 KAT14Q9H8E8 782 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 PDGFCQ9NRA1 345 aa19.12■□□□□ 0.65
CTDSP1-204ENST00000443891 KPNA6O60684 536 aa19.11■□□□□ 0.65
CTDSP1-204ENST00000443891 KDM4AO75164 1064 aa19.11■□□□□ 0.65
CTDSP1-204ENST00000443891 RPS6P62753 249 aaKnown RBP19.11■□□□□ 0.65
CTDSP1-204ENST00000443891 ASPRV1Q53RT3 343 aa19.11■□□□□ 0.65
CTDSP1-204ENST00000443891 RASIP1Q5U651 963 aa19.11■□□□□ 0.65
CTDSP1-204ENST00000443891 EEPD1Q7L9B9 569 aa19.11■□□□□ 0.65
CTDSP1-204ENST00000443891 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.11■□□□□ 0.651e-10■■□□□ 14.2
CTDSP1-204ENST00000443891 COL6A3P12111 3177 aa19.11■□□□□ 0.65
CTDSP1-204ENST00000443891 ABCB11O95342 1321 aa19.1■□□□□ 0.65
CTDSP1-204ENST00000443891 SUPT20HL2P0C7V6 817 aa19.1■□□□□ 0.65
CTDSP1-204ENST00000443891 CALML3P27482 149 aa19.1■□□□□ 0.65
CTDSP1-204ENST00000443891 PDE4DQ08499 809 aa19.1■□□□□ 0.65
CTDSP1-204ENST00000443891 TMEM240Q5SV17 173 aa19.1■□□□□ 0.65
CTDSP1-204ENST00000443891 SCFD2Q8WU76 684 aa19.1■□□□□ 0.65
CTDSP1-204ENST00000443891 FAM161BQ96MY7 647 aa19.1■□□□□ 0.65
CTDSP1-204ENST00000443891 ZSCAN10Q96SZ4 725 aaPredicted RBP19.1■□□□□ 0.65
CTDSP1-204ENST00000443891 LRRC37A2A6NM11 1700 aa19.1■□□□□ 0.65
CTDSP1-204ENST00000443891 CSF2RAP15509 400 aa19.09■□□□□ 0.65
CTDSP1-204ENST00000443891 SLC30A10Q6XR72 485 aa19.09■□□□□ 0.65
CTDSP1-204ENST00000443891 MCF2L2Q86YR7 1114 aa19.09■□□□□ 0.65
CTDSP1-204ENST00000443891 PURBQ96QR8 312 aaKnown RBP19.09■□□□□ 0.65
CTDSP1-204ENST00000443891 TTYH1Q9H313 450 aaPredicted RBP19.09■□□□□ 0.65
CTDSP1-204ENST00000443891 HIPK3Q9H422 1215 aa19.09■□□□□ 0.65
CTDSP1-204ENST00000443891 IL23AQ9NPF7 189 aa19.09■□□□□ 0.65
CTDSP1-204ENST00000443891 GRIN2DO15399 1336 aa19.08■□□□□ 0.65
CTDSP1-204ENST00000443891 PPP2R5BQ15173 497 aa19.08■□□□□ 0.64
CTDSP1-204ENST00000443891 C16orf59Q7L2K0 433 aa19.08■□□□□ 0.64
CTDSP1-204ENST00000443891 RPUSD2Q8IZ73 545 aaKnown RBP19.08■□□□□ 0.64
CTDSP1-204ENST00000443891 HERVK_113Q902F9 699 aa19.08■□□□□ 0.64
CTDSP1-204ENST00000443891 ZKSCAN3Q9BRR0 538 aa19.08■□□□□ 0.64
CTDSP1-204ENST00000443891 GPHNQ9NQX3 736 aaPredicted RBP19.08■□□□□ 0.64
CTDSP1-204ENST00000443891 ZSWIM5Q9P217 1185 aa19.08■□□□□ 0.64
CTDSP1-204ENST00000443891 B4E1Z4 1266 aa19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 PARP1P09874 1014 aaKnown RBP19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 DNAJB2P25686 324 aa19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 PURAQ00577 322 aaKnown RBP19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 TTLL4Q14679 1199 aa19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 CDC37Q16543 378 aaPredicted RBP19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 SAMD3Q8N6K7 520 aa19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 ENAHQ8N8S7 591 aaPredicted RBP19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 RUFY2Q8WXA3 655 aa19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 IWS1Q96ST2 819 aa19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 UBAC1Q9BSL1 405 aa19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 MTG1Q9BT17 334 aaPredicted RBP19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 PPP1R12CQ9BZL4 782 aa19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 ALDH8A1Q9H2A2 487 aaPredicted RBP19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 MAP3K20Q9NYL2 800 aaKnown RBP19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 MRPL11Q9Y3B7 192 aaKnown RBP19.07■□□□□ 0.64
CTDSP1-204ENST00000443891 TNKSO95271 1327 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 A6NJR5 290 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 FGBP02675 491 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 PFKMP08237 780 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 GOLGA8HP0CJ92 632 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 PTPN11Q06124 597 aaPredicted RBP19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 TRAF1Q13077 416 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 ZNF365Q70YC5 407 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 ADGRF4Q8IZF3 695 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 OR6J1Q8NGC5 347 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 MAFAQ8NHW3 353 aaPredicted RBP19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 NSUN6Q8TEA1 469 aaKnown RBP19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 NOC4LQ9BVI4 516 aaKnown RBP19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 UBA5Q9GZZ9 404 aa19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 DDX49Q9Y6V7 483 aaKnown RBP19.06■□□□□ 0.64
CTDSP1-204ENST00000443891 LAMA4Q16363 1823 aa19.05■□□□□ 0.64
CTDSP1-204ENST00000443891 B4GALT4O60513 344 aa19.05■□□□□ 0.64
CTDSP1-204ENST00000443891 CYP2C18P33260 490 aa19.05■□□□□ 0.64
CTDSP1-204ENST00000443891 RAB30Q15771 203 aa19.05■□□□□ 0.64
CTDSP1-204ENST00000443891 USH1GQ495M9 461 aa19.05■□□□□ 0.64
CTDSP1-204ENST00000443891 NFRKBQ6P4R8 1299 aa19.05■□□□□ 0.64
CTDSP1-204ENST00000443891 FBXO11Q86XK2 927 aa19.05■□□□□ 0.64
CTDSP1-204ENST00000443891 TIFAQ96CG3 184 aa19.05■□□□□ 0.64
CTDSP1-204ENST00000443891 LCTP09848 1927 aa19.05■□□□□ 0.64
CTDSP1-204ENST00000443891 TXNP10599 105 aaKnown RBP19.04■□□□□ 0.64
CTDSP1-204ENST00000443891 FOSL2P15408 326 aa19.04■□□□□ 0.64
CTDSP1-204ENST00000443891 TRDNQ13061 729 aa19.04■□□□□ 0.64
CTDSP1-204ENST00000443891 TMEM63BQ5T3F8 832 aa19.04■□□□□ 0.64
CTDSP1-204ENST00000443891 IFIT1BQ5T764 474 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms