RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 HOXC10Q9NYD6 342 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 CGNQ9P2M7 1197 aaKnown RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PRR12Q9ULL5 1215 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PCDHA12Q9UN75 941 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 JAG2Q9Y219 1238 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 BCS1LQ9Y276 419 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 SLC45A1Q9Y2W3 748 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 DAAM1Q9Y4D1 1078 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PPME1Q9Y570 386 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PCDHA1Q9Y5I3 950 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 COL4A5P29400 1685 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 LOC285556D6RIA3 1793 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 RBBP6Q7Z6E9 1792 aaKnown RBP3.19□□□□□ -1.9
LINC00393-201ENST00000443621 ADAMTSL1Q8N6G6 1762 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PAPPA2Q9BXP8 1791 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PARP14Q460N5 1801 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 PHIPQ8WWQ0 1821 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 WDR90Q96KV7 1748 aa3.19□□□□□ -1.9
LINC00393-201ENST00000443621 A0A0U1RQG5 324 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 A0A1W2PRG0 241 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 BICDL2A1A5D9 508 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 FRMD3A2A2Y4 597 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 VWA3AA6NCI4 1184 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ESPNB1AK53 854 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 TMEM232C9JQI7 657 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 GCOM1H8Y6P7 765 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 SMIM22K7EJ46 135 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 KIF2AO00139 706 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 MEIS1O00470 390 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 IRF6O14896 467 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 CCP110O43303 1012 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PPP1R12BO60237 982 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 CCNT1O60563 726 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ZBED4O75132 1171 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ZBTB7AO95365 584 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 LYPLA2O95372 231 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 GNA14O95837 355 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 POLR2MP0CAP2 368 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 TGFB3P10600 412 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 MAPTP10636 758 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF18P17022 549 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 MSNP26038 577 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 EEF1GP26641 437 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 RPA1P27694 616 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 LMOD1P29536 600 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 SFNP31947 248 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 NF2P35240 595 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 GMPSP49915 693 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 CEBPZQ03701 1054 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 LRRC63Q05C16 580 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PPP2R3AQ06190 1150 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PPATQ06203 517 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ENPEPQ07075 957 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 TCP10Q12799 353 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 DPYDQ12882 1025 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PPP2R5CQ13362 524 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ALCAMQ13740 583 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 TRIM14Q14142 442 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 MYBPC2Q14324 1141 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 COG2Q14746 738 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 R3HDM1Q15032 1099 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 CDC37Q16543 378 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 CALCRLQ16602 461 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 NFIL3Q16649 462 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 SLC35G1Q2M3R5 365 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 QRICH1Q2TAL8 776 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 NBPF9Q3BBW0 867 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 FOXD4L6Q3SYB3 417 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 CEP55Q53EZ4 464 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 SPATA1Q5VX52 437 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 RRAGBQ5VZM2 374 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 KRT79Q5XKE5 535 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PCNX4Q63HM2 1172 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 OTUD7BQ6GQQ9 843 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PDXDC2PQ6P474 469 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 KCNV1Q6PIU1 500 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 B3GNT9Q6UX72 402 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 FOXD4L3Q6VB84 417 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 SV2BQ7L1I2 683 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 FCHSD1Q86WN1 690 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 FMNL3Q8IVF7 1028 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ZFPM1Q8IX07 1006 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 MICALL2Q8IY33 904 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 EXOC8Q8IYI6 725 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 CMTR1Q8N1G2 835 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 GUF1Q8N442 669 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 RETREG2Q8NC44 543 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PROCA1Q8NCQ7 364 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 GIMAP8Q8ND71 665 aaPredicted RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF280CQ8ND82 737 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 CHST13Q8NET6 341 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ANKRD20A12PQ8NF67 263 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 DNERQ8NFT8 737 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 ERMNQ8TAM6 284 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 PAGE5Q96GU1 130 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 IWS1Q96ST2 819 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 MPHOSPH6Q99547 160 aaKnown RBP3.18□□□□□ -1.9
LINC00393-201ENST00000443621 FEZ1Q99689 392 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 SLF1Q9BQI6 1058 aa3.18□□□□□ -1.9
LINC00393-201ENST00000443621 MXD3Q9BW11 206 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms