RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 EPB41L4AQ9HCS5 686 aaPredicted RBP7.05□□□□□ -1.28
PTPRR-204ENST00000440835 HELLSQ9NRZ9 838 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 TMEM232C9JQI7 657 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 TNFRSF10AO00220 468 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 RAD21O60216 631 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 APPP05067 770 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 ACTN1P12814 892 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 EPHB4P54760 987 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 MFAP1P55081 439 aaKnown RBP7.05□□□□□ -1.28
PTPRR-204ENST00000440835 DUSP28Q4G0W2 176 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 TLK2Q86UE8 772 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 CPXCR1Q8N123 301 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 CCDC155Q8N6L0 562 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 VTI1AQ96AJ9 217 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 TRERF1Q96PN7 1200 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 A1CFQ9NQ94 594 aaKnown RBP7.05□□□□□ -1.28
PTPRR-204ENST00000440835 RNF216Q9NWF9 866 aaPredicted RBP7.05□□□□□ -1.28
PTPRR-204ENST00000440835 THEGQ9P2T0 379 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 TANC1Q9C0D5 1861 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 MRPS5P82675 430 aaKnown RBP7.05□□□□□ -1.28
PTPRR-204ENST00000440835 TFAP4Q01664 338 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 HDAC1Q13547 482 aaPredicted RBP7.05□□□□□ -1.28
PTPRR-204ENST00000440835 ITGA7Q13683 1181 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 SAMD3Q8N6K7 520 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 NUP88Q99567 741 aaPredicted RBP7.05□□□□□ -1.28
PTPRR-204ENST00000440835 CYP39A1Q9NYL5 469 aa7.05□□□□□ -1.28
PTPRR-204ENST00000440835 ZNF536O15090 1300 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 LCTP09848 1927 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 SOWAHBA6NEL2 793 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 M0R2C6 588 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 PITPNM1O00562 1244 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 BAIAP3O94812 1187 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 TOP1P11387 765 aaKnown RBP7.04□□□□□ -1.28
PTPRR-204ENST00000440835 NFRKBQ6P4R8 1299 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 EVI5LQ96CN4 794 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 SLC9A7Q96T83 725 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 NOC4LQ9BVI4 516 aaKnown RBP7.04□□□□□ -1.28
PTPRR-204ENST00000440835 HIPK3Q9H422 1215 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 CXXC1Q9P0U4 656 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-204ENST00000440835 TNKSO95271 1327 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 GRIN2CQ14957 1233 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 TAPT1Q6NXT6 567 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 ZNF365Q70YC5 407 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 C16orf59Q7L2K0 433 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 SMAP1Q8IYB5 467 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-204ENST00000440835 PI4K2BQ8TCG2 481 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 SECISBP2LQ93073 1101 aaKnown RBP7.04□□□□□ -1.28
PTPRR-204ENST00000440835 FAM161BQ96MY7 647 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 MTG1Q9BT17 334 aaPredicted RBP7.04□□□□□ -1.28
PTPRR-204ENST00000440835 FSD1Q9BTV5 496 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 PBX4Q9BYU1 374 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 LMCD1Q9NZU5 365 aa7.04□□□□□ -1.28
PTPRR-204ENST00000440835 LAMA4Q16363 1823 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 GBF1Q92538 1859 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 SCN10AQ9Y5Y9 1956 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 MYADML2A6NDP7 307 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 TSPY2A6NKD2 308 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 EFCAB14O75071 495 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 MRE11P49959 708 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 IKQ13123 557 aaPredicted RBP7.03□□□□□ -1.28
PTPRR-204ENST00000440835 BFSP2Q13515 415 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 GPATCH4Q5T3I0 446 aaKnown RBP7.03□□□□□ -1.28
PTPRR-204ENST00000440835 SESTD1Q86VW0 696 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 RNF41Q9H4P4 317 aaPredicted RBP7.03□□□□□ -1.28
PTPRR-204ENST00000440835 CCPG1Q9ULG6 757 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 PRR12Q9ULL5 1215 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 COG5Q9UP83 839 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 SLC4A7Q9Y6M7 1214 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 CSF2RAP15509 400 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 MX1P20591 662 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 TRAF1Q13077 416 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 SYDE2Q5VT97 1194 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 FAM43BQ6ZT52 329 aaPredicted RBP7.03□□□□□ -1.28
PTPRR-204ENST00000440835 LRRC47Q8N1G4 583 aaKnown RBP7.03□□□□□ -1.28
PTPRR-204ENST00000440835 ASB2Q96Q27 587 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 SLC28A3Q9HAS3 691 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 MAP3K20Q9NYL2 800 aaKnown RBP7.03□□□□□ -1.28
PTPRR-204ENST00000440835 ASTN1O14525 1302 aa7.03□□□□□ -1.28
PTPRR-204ENST00000440835 SEC24BO95487 1268 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 ALAS1P13196 640 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 SMPD1P17405 629 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 EDNRBP24530 442 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 ALDH5A1P51649 535 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-204ENST00000440835 RBL2Q08999 1139 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 SLFNL1Q499Z3 407 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 CAGE1Q8TC20 777 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 SCFD2Q8WU76 684 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 ALDH8A1Q9H2A2 487 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-204ENST00000440835 GRPEL1Q9HAV7 217 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 GPHNQ9NQX3 736 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-204ENST00000440835 PCDHB15Q9Y5E8 787 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 SALL3Q9BXA9 1300 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 SMIM22K7EJ46 135 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 ADCY6O43306 1168 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 SMARCA5O60264 1052 aaPredicted RBP7.02□□□□□ -1.29
PTPRR-204ENST00000440835 CNTN2Q02246 1040 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 NOL8Q76FK4 1167 aaKnown RBP7.02□□□□□ -1.29
PTPRR-204ENST00000440835 RETREG2Q8NC44 543 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 AGBL1Q96MI9 1066 aa7.02□□□□□ -1.29
PTPRR-204ENST00000440835 IWS1Q96ST2 819 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms