RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 BRWD1Q9NSI6 2320 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 TRIP12Q14669 1992 aaPredicted RBP17.59■□□□□ 0.41
HDAC8-213ENST00000436675 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
HDAC8-213ENST00000436675 ERC2O15083 957 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 ARHGEF15O94989 841 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 GNAT2P19087 354 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 PDE4BQ07343 736 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 GMCL1Q96IK5 515 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 SEC62Q99442 399 aaKnown RBP17.59■□□□□ 0.41
HDAC8-213ENST00000436675 SEZ6LQ9BYH1 1024 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 VTA1Q9NP79 307 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 CCPG1Q9ULG6 757 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 PRR12Q9ULL5 1215 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 SYNPO2Q9UMS6 1093 aa17.59■□□□□ 0.41
HDAC8-213ENST00000436675 FTOQ9C0B1 505 aaKnown RBP eCLIP17.58■□□□□ 0.4
HDAC8-213ENST00000436675 INCENPQ9NQS7 918 aa17.58■□□□□ 0.4
HDAC8-213ENST00000436675 STX8Q9UNK0 236 aa17.58■□□□□ 0.4
HDAC8-213ENST00000436675 Q9Y3F1 56 aa17.58■□□□□ 0.4
HDAC8-213ENST00000436675 PLIN4Q96Q06 1357 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 NMT2O60551 498 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 SUPT20HL2P0C7V6 817 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 ACTN1P12814 892 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 CHMP4BP1P59074 171 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 BAATQ14032 418 aaPredicted RBP17.57■□□□□ 0.4
HDAC8-213ENST00000436675 DUSP28Q4G0W2 176 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 RCSD1Q6JBY9 416 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 LRFN3Q9BTN0 628 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 WDR11Q9BZH6 1224 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 POLR3EQ9NVU0 708 aa17.57■□□□□ 0.4
HDAC8-213ENST00000436675 SLC3A2P08195 630 aaKnown RBP17.56■□□□□ 0.4
HDAC8-213ENST00000436675 PFKMP08237 780 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 PURAQ00577 322 aaKnown RBP17.56■□□□□ 0.4
HDAC8-213ENST00000436675 TAP1Q03518 808 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 PPARAQ07869 468 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 CCDC96Q2M329 555 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 NBPF20Q3BBV1 942 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 SPRED2Q7Z698 418 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 OR6J1Q8NGC5 347 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 NACAP1Q9BZK3 213 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 NAPBQ9H115 298 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
HDAC8-213ENST00000436675 PTPRSQ13332 1948 aa17.56■□□□□ 0.4
HDAC8-213ENST00000436675 SCN10AQ9Y5Y9 1956 aa17.55■□□□□ 0.4
HDAC8-213ENST00000436675 TANC1Q9C0D5 1861 aa17.55■□□□□ 0.4
HDAC8-213ENST00000436675 ZFYP08048 801 aaPredicted RBP17.55■□□□□ 0.4
HDAC8-213ENST00000436675 SLC16A2P36021 539 aa17.55■□□□□ 0.4
HDAC8-213ENST00000436675 ALDH5A1P51649 535 aaPredicted RBP17.55■□□□□ 0.4
HDAC8-213ENST00000436675 CTDSPL2Q05D32 466 aa17.55■□□□□ 0.4
HDAC8-213ENST00000436675 GPATCH3Q96I76 525 aa17.55■□□□□ 0.4
HDAC8-213ENST00000436675 MTG1Q9BT17 334 aaPredicted RBP17.55■□□□□ 0.4
HDAC8-213ENST00000436675 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 FAM86C2PA6NEL3 165 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 TSPY2A6NKD2 308 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 NFIBO00712 420 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 TLL1O43897 1013 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 PLA2G6O60733 806 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 POU3F3P20264 500 aaPredicted RBP17.54■□□□□ 0.4
HDAC8-213ENST00000436675 CPT1AP50416 773 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 TTBK2Q6IQ55 1244 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 HERC6Q8IVU3 1022 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 RETREG2Q8NC44 543 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 MORC4Q8TE76 937 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 COPS5Q92905 334 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 KHSRPQ92945 711 aaKnown RBP eCLIP17.54■□□□□ 0.4
HDAC8-213ENST00000436675 SLC9A7Q96T83 725 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 IL17RBQ9NRM6 502 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 COG5Q9UP83 839 aa17.54■□□□□ 0.4
HDAC8-213ENST00000436675 COL4A4P53420 1690 aaPredicted RBP17.54■□□□□ 0.4
HDAC8-213ENST00000436675 RBAK-RBAKDNI3L0D1 243 aa17.53■□□□□ 0.4
HDAC8-213ENST00000436675 ICAM1P05362 532 aa17.53■□□□□ 0.4
HDAC8-213ENST00000436675 IQCF3P0C7M6 154 aa17.53■□□□□ 0.4
HDAC8-213ENST00000436675 CALML3P27482 149 aa17.53■□□□□ 0.4
HDAC8-213ENST00000436675 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
HDAC8-213ENST00000436675 GRB10Q13322 594 aa17.53■□□□□ 0.4
HDAC8-213ENST00000436675 TMCO2Q7Z6W1 182 aaPredicted RBP17.53■□□□□ 0.4
HDAC8-213ENST00000436675 HLA-CQ95604 372 aa17.53■□□□□ 0.4
HDAC8-213ENST00000436675 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
HDAC8-213ENST00000436675 ADD3Q9UEY8 706 aaKnown RBP17.53■□□□□ 0.4
HDAC8-213ENST00000436675 HCN4Q9Y3Q4 1203 aa17.53■□□□□ 0.4
HDAC8-213ENST00000436675 KIF28PB7ZC32 967 aa17.52■□□□□ 0.4
HDAC8-213ENST00000436675 RANBP6O60518 1105 aaKnown RBP17.52■□□□□ 0.4
HDAC8-213ENST00000436675 RFC2P35250 354 aa17.52■□□□□ 0.4
HDAC8-213ENST00000436675 TMEM31Q5JXX7 168 aa17.52■□□□□ 0.4
HDAC8-213ENST00000436675 SLC30A10Q6XR72 485 aa17.52■□□□□ 0.4
HDAC8-213ENST00000436675 PHOSPHO2Q8TCD6 241 aa17.52■□□□□ 0.4
HDAC8-213ENST00000436675 GPCPD1Q9NPB8 672 aa17.52■□□□□ 0.4
HDAC8-213ENST00000436675 NOD1Q9Y239 953 aa17.52■□□□□ 0.4
HDAC8-213ENST00000436675 MUC6Q6W4X9 2439 aa17.52■□□□□ 0.4
HDAC8-213ENST00000436675 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
HDAC8-213ENST00000436675 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
HDAC8-213ENST00000436675 PPP2R5BQ15173 497 aa17.51■□□□□ 0.39
HDAC8-213ENST00000436675 BRDTQ58F21 947 aaPredicted RBP17.51■□□□□ 0.39
HDAC8-213ENST00000436675 C20orf194Q5TEA3 1177 aa17.51■□□□□ 0.39
HDAC8-213ENST00000436675 SYDE2Q5VT97 1194 aa17.51■□□□□ 0.39
HDAC8-213ENST00000436675 RANBP17Q9H2T7 1088 aaKnown RBP17.51■□□□□ 0.39
HDAC8-213ENST00000436675 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.51■□□□□ 0.39
HDAC8-213ENST00000436675 RBM47A0AV96 593 aaKnown RBP17.5■□□□□ 0.39
HDAC8-213ENST00000436675 LPXNO60711 386 aa17.5■□□□□ 0.39
HDAC8-213ENST00000436675 KCNJ6P48051 423 aa17.5■□□□□ 0.39
HDAC8-213ENST00000436675 PDE4DQ08499 809 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms