RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 LMNB1P20700 586 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 CMA1P23946 247 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 LMOD1P29536 600 aaPredicted RBP8.08□□□□□ -1.12
GARNL3-205ENST00000435213 CCT6AP40227 531 aaKnown RBP8.08□□□□□ -1.12
GARNL3-205ENST00000435213 ANKK1Q8NFD2 765 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 HAUS7Q99871 368 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 EIF2AQ9BY44 585 aaKnown RBP8.08□□□□□ -1.12
GARNL3-205ENST00000435213 SIL1Q9H173 461 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 HSD3B7Q9H2F3 369 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 COPRSQ9NQ92 184 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 KCNQ3O43525 872 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 TBC1D12O60347 775 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 FLOT1O75955 427 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 PDIA3P30101 505 aaKnown RBP8.08□□□□□ -1.12
GARNL3-205ENST00000435213 TCF7P36402 384 aaPredicted RBP8.08□□□□□ -1.12
GARNL3-205ENST00000435213 LBRQ14739 615 aaKnown RBP8.08□□□□□ -1.12
GARNL3-205ENST00000435213 CNGA3Q16281 694 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 TNNI3KQ59H18 835 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 RC3H1Q5TC82 1133 aaKnown RBP8.08□□□□□ -1.12
GARNL3-205ENST00000435213 TMEM139Q8IV31 216 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 P3H4Q92791 437 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 NDNQ99608 321 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 LRRC2Q9BYS8 371 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 CCDC68Q9H2F9 335 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 LGR6Q9HBX8 967 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 FPGT-TNNI3KV9GXZ4 949 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 SLIT3O75094 1523 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 NWD2Q9ULI1 1742 aa8.08□□□□□ -1.12
GARNL3-205ENST00000435213 GPR75-ASB3A0A0A6YYF3 556 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 ATP6V1G2O95670 118 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 SERPINC1P01008 464 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 GNG11P61952 73 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 MKRN4PQ13434 485 aaPredicted RBP8.07□□□□□ -1.12
GARNL3-205ENST00000435213 SLC44A4Q53GD3 710 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 CFAP157Q5JU67 520 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 POTEEQ6S8J3 1075 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 CCDC129Q6ZRS4 1044 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 SLC15A3Q8IY34 581 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 DBNLQ9UJU6 430 aaKnown RBP8.07□□□□□ -1.12
GARNL3-205ENST00000435213 ASB3Q9Y575 518 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 CLIC4Q9Y696 253 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 ARFGEF2Q9Y6D5 1785 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 PARP4Q9UKK3 1724 aaKnown RBP8.07□□□□□ -1.12
GARNL3-205ENST00000435213 STX10O60499 249 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 LDHAP00338 332 aaKnown RBP8.07□□□□□ -1.12
GARNL3-205ENST00000435213 PFKFB1P16118 471 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 CCT8P50990 548 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 KCNA1Q09470 495 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 XRCC4Q13426 336 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 RIPK1Q13546 671 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 STIM1Q13586 685 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 KBTBD3Q8NAB2 608 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 EDC3Q96F86 508 aaKnown RBP8.07□□□□□ -1.12
GARNL3-205ENST00000435213 VCXQ9H320 206 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 HOXC10Q9NYD6 342 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 BICDL2A1A5D9 508 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 NDUFB5O43674 189 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 TBX2Q13207 712 aaPredicted RBP8.07□□□□□ -1.12
GARNL3-205ENST00000435213 CFAP100Q494V2 611 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 KIFC2Q96AC6 838 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 CLIP3Q96DZ5 547 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 ABHD8Q96I13 439 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 MAML3Q96JK9 1138 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 C8orf76Q96K31 380 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 TRAPPC9Q96Q05 1148 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 RSPH9Q9H1X1 276 aaPredicted RBP8.07□□□□□ -1.12
GARNL3-205ENST00000435213 ANKZF1Q9H8Y5 726 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 HAUS2Q9NVX0 235 aa8.07□□□□□ -1.12
GARNL3-205ENST00000435213 ZMAT5Q9UDW3 170 aaKnown RBP8.07□□□□□ -1.12
GARNL3-205ENST00000435213 KAT6BQ8WYB5 2073 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 FAM237AA0A1B0GTK4 181 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 GOLGA8KD6RF30 607 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 E7EWF7 191 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 N4BP3O15049 544 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 TBCAO75347 108 aaKnown RBP8.06□□□□□ -1.12
GARNL3-205ENST00000435213 FGFR1OPO95684 399 aaKnown RBP8.06□□□□□ -1.12
GARNL3-205ENST00000435213 HNRNPCP07910 306 aaKnown RBP eCLIP8.06□□□□□ -1.12
GARNL3-205ENST00000435213 FDPSP14324 419 aaKnown RBP8.06□□□□□ -1.12
GARNL3-205ENST00000435213 ZNF132P52740 706 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 CSE1LP55060 971 aaKnown RBP8.06□□□□□ -1.12
GARNL3-205ENST00000435213 MST1RQ04912 1400 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 PROSER3Q2NL68 480 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 SPECC1Q5M775 1068 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 LTV1Q96GA3 475 aaPredicted RBP8.06□□□□□ -1.12
GARNL3-205ENST00000435213 SEC62Q99442 399 aaKnown RBP8.06□□□□□ -1.12
GARNL3-205ENST00000435213 RPAP3Q9H6T3 665 aaPredicted RBP8.06□□□□□ -1.12
GARNL3-205ENST00000435213 DDX21Q9NR30 783 aaKnown RBP eCLIP8.06□□□□□ -1.12
GARNL3-205ENST00000435213 RHBDL2Q9NX52 303 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 CEP131Q9UPN4 1083 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 SSX2IPQ9Y2D8 614 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 KIF1AQ12756 1690 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 AKR1B10O60218 316 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 ATP1A3P13637 1013 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 PMS2P54278 862 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 ARHGEF6Q15052 776 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 SGSM1Q2NKQ1 1148 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 ANO1Q5XXA6 986 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 OLFM4Q6UX06 510 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 MAATS1Q7Z4T9 603 aa8.06□□□□□ -1.12
GARNL3-205ENST00000435213 USHBP1Q8N6Y0 703 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms