RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 NAALADL2Q58DX5 795 aa17.12■□□□□ 0.33
SF1-209ENST00000433274 PPP4R3AQ6IN85 833 aa17.12■□□□□ 0.33
SF1-209ENST00000433274 MRFAP1L1Q96HT8 127 aa17.12■□□□□ 0.33
SF1-209ENST00000433274 GSDMAQ96QA5 445 aa17.12■□□□□ 0.33
SF1-209ENST00000433274 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
SF1-209ENST00000433274 DACH1Q9UI36 760 aa17.12■□□□□ 0.33
SF1-209ENST00000433274 NBPF12Q5TAG4 269 aaPredicted RBP17.11■□□□□ 0.33
SF1-209ENST00000433274 CHURC1Q8WUH1 139 aa17.11■□□□□ 0.33
SF1-209ENST00000433274 FHDC1Q9C0D6 1143 aaPredicted RBP17.11■□□□□ 0.33
SF1-209ENST00000433274 NRBP1Q9UHY1 535 aa17.11■□□□□ 0.33
SF1-209ENST00000433274 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
SF1-209ENST00000433274 CDC25BP30305 580 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 FMR1Q06787 632 aaKnown RBP eCLIP17.1■□□□□ 0.33
SF1-209ENST00000433274 CCDC174Q6PII3 467 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 IGSF22Q8N9C0 903 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 HSD3B7Q9H2F3 369 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 ATP1A3P13637 1013 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 PLCG1P19174 1290 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 LMNB1P20700 586 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 PTGS1P23219 599 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 CLCN1P35523 988 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
SF1-209ENST00000433274 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 P2RX7Q99572 595 aaKnown RBP17.1■□□□□ 0.33
SF1-209ENST00000433274 FBXO28Q9NVF7 368 aa17.1■□□□□ 0.33
SF1-209ENST00000433274 GCFC2P16383 781 aaKnown RBP17.09■□□□□ 0.33
SF1-209ENST00000433274 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■□□□□ 10
SF1-209ENST00000433274 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 PRAMEF18Q5VWM3 479 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 TRMT44Q8IYL2 757 aaKnown RBP17.09■□□□□ 0.33
SF1-209ENST00000433274 SMYD4Q8IYR2 804 aaPredicted RBP17.09■□□□□ 0.33
SF1-209ENST00000433274 LRRC15Q8TF66 581 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 FANCLQ9NW38 375 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 IFNKQ9P0W0 207 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 LRWD1Q9UFC0 647 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 POTEMA6NI47 508 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 OPLAHO14841 1288 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 MARCH6O60337 910 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 HOXA13P31271 388 aaPredicted RBP17.09■□□□□ 0.33
SF1-209ENST00000433274 GJA10Q969M2 543 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 MMTAG2Q9BU76 263 aaKnown RBP17.09■□□□□ 0.33
SF1-209ENST00000433274 GPRC5DQ9NZD1 345 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 MYH7BA7E2Y1 1941 aa17.09■□□□□ 0.33
SF1-209ENST00000433274 SPDYE3A6NKU9 549 aa17.08■□□□□ 0.33
SF1-209ENST00000433274 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.33
SF1-209ENST00000433274 INPP5BP32019 993 aa17.08■□□□□ 0.33
SF1-209ENST00000433274 KLHL10Q6JEL2 608 aa17.08■□□□□ 0.33
SF1-209ENST00000433274 FAM160B2Q86V87 743 aa17.08■□□□□ 0.33
SF1-209ENST00000433274 UIMC1Q96RL1 719 aa17.08■□□□□ 0.33
SF1-209ENST00000433274 XPO4Q9C0E2 1151 aaKnown RBP17.08■□□□□ 0.33
SF1-209ENST00000433274 FEM1BQ9UK73 627 aa17.08■□□□□ 0.33
SF1-209ENST00000433274 TPM3P06753 285 aa17.08■□□□□ 0.32
SF1-209ENST00000433274 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
SF1-209ENST00000433274 USP11P51784 963 aa17.08■□□□□ 0.32
SF1-209ENST00000433274 FANCCQ00597 558 aa17.08■□□□□ 0.32
SF1-209ENST00000433274 HSP90AA4PQ58FG1 418 aa17.08■□□□□ 0.32
SF1-209ENST00000433274 GPC2Q8N158 579 aa17.08■□□□□ 0.32
SF1-209ENST00000433274 HAS1Q92839 578 aa17.08■□□□□ 0.32
SF1-209ENST00000433274 NAP1L4Q99733 375 aaKnown RBP17.08■□□□□ 0.32
SF1-209ENST00000433274 RAB34Q9BZG1 259 aa17.08■□□□□ 0.32
SF1-209ENST00000433274 RANBP17Q9H2T7 1088 aaKnown RBP17.08■□□□□ 0.32
SF1-209ENST00000433274 RPN1P04843 607 aaKnown RBP17.07■□□□□ 0.32
SF1-209ENST00000433274 EPS15P42566 896 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 ARHGAP4P98171 946 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 CALML4Q96GE6 196 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 KCNF1Q9H3M0 494 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 NFE2L3Q9Y4A8 694 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 ATAD5Q96QE3 1844 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 PLA2G6O60733 806 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 ERCC5P28715 1186 aaPredicted RBP17.07■□□□□ 0.32
SF1-209ENST00000433274 DGKZQ13574 1117 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 CCDC144BQ3MJ40 725 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 MCTP2Q6DN12 878 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 APOBEC3FQ8IUX4 373 aaKnown RBP17.07■□□□□ 0.32
SF1-209ENST00000433274 ENOX1Q8TC92 643 aaKnown RBP17.07■□□□□ 0.32
SF1-209ENST00000433274 MED15Q96RN5 788 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 GGA3Q9NZ52 723 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 FZD1Q9UP38 647 aa17.07■□□□□ 0.32
SF1-209ENST00000433274 FOSP01100 380 aaPredicted RBP17.06■□□□□ 0.32
SF1-209ENST00000433274 TRAF1Q13077 416 aa17.06■□□□□ 0.32
SF1-209ENST00000433274 PDIA5Q14554 519 aa17.06■□□□□ 0.32
SF1-209ENST00000433274 DCAF15Q66K64 600 aa17.06■□□□□ 0.32
SF1-209ENST00000433274 FCHSD1Q86WN1 690 aa17.06■□□□□ 0.32
SF1-209ENST00000433274 CUEDC2Q9H467 287 aa17.06■□□□□ 0.32
SF1-209ENST00000433274 CFBP00751 764 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 SERPINC1P01008 464 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 STX17P56962 302 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 RMND1Q9NWS8 449 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 SRCAPQ6ZRS2 3230 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 SMCHD1A6NHR9 2005 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 PPP1R3GB7ZBB8 358 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 GRB10Q13322 594 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 DHX8Q14562 1220 aaKnown RBP17.05■□□□□ 0.32
SF1-209ENST00000433274 FILIP1Q7Z7B0 1213 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 SNX29Q8TEQ0 813 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 UBE2Q2Q8WVN8 375 aa17.05■□□□□ 0.32
SF1-209ENST00000433274 CRYGNQ8WXF5 182 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms