RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 NONOQ15233 471 aaKnown RBP eCLIP30.25■■■□□ 2.43
TMEM248-205ENST00000433271 CHST13Q8NET6 341 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 TBC1D5Q92609 795 aa30.25■■■□□ 2.43
TMEM248-205ENST00000433271 MAP3K20Q9NYL2 800 aaKnown RBP30.25■■■□□ 2.43
TMEM248-205ENST00000433271 NOL7Q9UMY1 257 aaKnown RBP30.25■■■□□ 2.43
TMEM248-205ENST00000433271 TRAPPC10P48553 1259 aa30.24■■■□□ 2.43
TMEM248-205ENST00000433271 TOB1P50616 345 aaPredicted RBP30.24■■■□□ 2.43
TMEM248-205ENST00000433271 HSD17B4P51659 736 aa30.24■■■□□ 2.43
TMEM248-205ENST00000433271 CAPNS2Q96L46 248 aa30.24■■■□□ 2.43
TMEM248-205ENST00000433271 MAF1Q9H063 256 aa30.24■■■□□ 2.43
TMEM248-205ENST00000433271 TFIP11Q9UBB9 837 aaKnown RBP30.24■■■□□ 2.43
TMEM248-205ENST00000433271 NCLP19338 710 aaKnown RBP30.23■■■□□ 2.43
TMEM248-205ENST00000433271 HOXA13P31271 388 aaPredicted RBP30.23■■■□□ 2.43
TMEM248-205ENST00000433271 USP28Q96RU2 1077 aa30.23■■■□□ 2.43
TMEM248-205ENST00000433271 ZIC5Q96T25 663 aa30.23■■■□□ 2.43
TMEM248-205ENST00000433271 ACAD9Q9H845 621 aa30.23■■■□□ 2.43
TMEM248-205ENST00000433271 MYH15Q9Y2K3 1946 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 SLC25A27O95847 323 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 COPB2P35606 906 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 MOV10L1Q9BXT6 1211 aaKnown RBP30.22■■■□□ 2.43
TMEM248-205ENST00000433271 CNPY2Q9Y2B0 182 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 SPDYE3A6NKU9 549 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 ERVK-9P63128 1117 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 ERVK-24P63145 666 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 Q3C1V9 767 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 GPRC5AQ8NFJ5 357 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 FBXO40Q9UH90 709 aa30.22■■■□□ 2.43
TMEM248-205ENST00000433271 INF2Q27J81 1249 aa30.21■■■□□ 2.43
TMEM248-205ENST00000433271 SCAND2PQ9GZW5 306 aaPredicted RBP30.21■■■□□ 2.43
TMEM248-205ENST00000433271 POLR3EQ9NVU0 708 aa30.21■■■□□ 2.43
TMEM248-205ENST00000433271 RTEL1Q9NZ71 1219 aa30.21■■■□□ 2.43
TMEM248-205ENST00000433271 MORF4L1Q9UBU8 362 aa30.21■■■□□ 2.43
TMEM248-205ENST00000433271 REM2Q8IYK8 340 aaPredicted RBP30.2■■■□□ 2.43
TMEM248-205ENST00000433271 TBCKQ8TEA7 893 aa30.2■■■□□ 2.43
TMEM248-205ENST00000433271 PGBD1Q96JS3 809 aa30.2■■■□□ 2.43
TMEM248-205ENST00000433271 ANO3Q9BYT9 981 aa30.2■■■□□ 2.43
TMEM248-205ENST00000433271 TCHHQ07283 1943 aa30.2■■■□□ 2.42
TMEM248-205ENST00000433271 TAF1CQ15572 869 aaPredicted RBP30.19■■■□□ 2.42
TMEM248-205ENST00000433271 ANO1Q5XXA6 986 aa30.19■■■□□ 2.42
TMEM248-205ENST00000433271 RNF207Q6ZRF8 634 aa30.19■■■□□ 2.42
TMEM248-205ENST00000433271 FCHSD1Q86WN1 690 aa30.19■■■□□ 2.42
TMEM248-205ENST00000433271 ANKRD13CQ8N6S4 541 aa30.19■■■□□ 2.42
TMEM248-205ENST00000433271 FTOQ9C0B1 505 aaKnown RBP eCLIP30.19■■■□□ 2.42
TMEM248-205ENST00000433271 ATP2B1P20020 1258 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 NASPP49321 788 aaPredicted RBP30.18■■■□□ 2.42
TMEM248-205ENST00000433271 RPS6P62753 249 aaKnown RBP30.18■■■□□ 2.42
TMEM248-205ENST00000433271 CCNA1P78396 465 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 CEBPZQ03701 1054 aaKnown RBP30.18■■■□□ 2.42
TMEM248-205ENST00000433271 NSMFQ6X4W1 530 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 NCAPG2Q86XI2 1143 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 SHCBP1Q8NEM2 672 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 CLIC4Q9Y696 253 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 ERCC3P19447 782 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 TTC38Q5R3I4 469 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 NEK8Q86SG6 692 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 SYTL5Q8TDW5 730 aaPredicted RBP30.18■■■□□ 2.42
TMEM248-205ENST00000433271 MROH8Q9H579 483 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 PCDHB6Q9Y5E3 794 aa30.18■■■□□ 2.42
TMEM248-205ENST00000433271 FIBPO43427 364 aa30.17■■■□□ 2.42
TMEM248-205ENST00000433271 AOC2O75106 756 aa30.17■■■□□ 2.42
TMEM248-205ENST00000433271 NBR1Q14596 966 aa30.17■■■□□ 2.42
TMEM248-205ENST00000433271 RCOR1Q9UKL0 485 aa30.17■■■□□ 2.42
TMEM248-205ENST00000433271 ADGRA2Q96PE1 1338 aa30.16■■■□□ 2.42
TMEM248-205ENST00000433271 GOLGA6L22H0YM25 854 aa30.16■■■□□ 2.42
TMEM248-205ENST00000433271 BAATQ14032 418 aaPredicted RBP30.16■■■□□ 2.42
TMEM248-205ENST00000433271 SF3A1Q15459 793 aaKnown RBP30.16■■■□□ 2.42
TMEM248-205ENST00000433271 FAM110CQ1W6H9 321 aa30.16■■■□□ 2.42
TMEM248-205ENST00000433271 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.16■■■□□ 2.42
TMEM248-205ENST00000433271 SPATA32Q96LK8 384 aa30.16■■■□□ 2.42
TMEM248-205ENST00000433271 GDPD2Q9HCC8 539 aa30.16■■■□□ 2.42
TMEM248-205ENST00000433271 A1CFQ9NQ94 594 aaKnown RBP30.16■■■□□ 2.42
TMEM248-205ENST00000433271 CYP39A1Q9NYL5 469 aa30.16■■■□□ 2.42
TMEM248-205ENST00000433271 RBBP6Q7Z6E9 1792 aaKnown RBP30.16■■■□□ 2.42
TMEM248-205ENST00000433271 YEATS4O95619 227 aa30.15■■■□□ 2.42
TMEM248-205ENST00000433271 MCM4P33991 863 aa30.15■■■□□ 2.42
TMEM248-205ENST00000433271 SREBF1P36956 1147 aa30.15■■■□□ 2.42
TMEM248-205ENST00000433271 CSPP1Q1MSJ5 1256 aa30.15■■■□□ 2.42
TMEM248-205ENST00000433271 SLC30A10Q6XR72 485 aa30.15■■■□□ 2.42
TMEM248-205ENST00000433271 LEO1Q8WVC0 666 aaPredicted RBP30.15■■■□□ 2.42
TMEM248-205ENST00000433271 EHMT1Q9H9B1 1298 aa30.15■■■□□ 2.42
TMEM248-205ENST00000433271 ZFYVE28Q9HCC9 887 aa30.15■■■□□ 2.42
TMEM248-205ENST00000433271 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.15■■■□□ 2.42
TMEM248-205ENST00000433271 COL20A1Q9P218 1284 aa30.15■■■□□ 2.42
TMEM248-205ENST00000433271 WNT7AO00755 349 aa30.14■■■□□ 2.42
TMEM248-205ENST00000433271 ALDH1A1P00352 501 aa30.14■■■□□ 2.42
TMEM248-205ENST00000433271 USP11P51784 963 aa30.14■■■□□ 2.42
TMEM248-205ENST00000433271 LINC00301Q8NCQ3 95 aa30.14■■■□□ 2.42
TMEM248-205ENST00000433271 CRYGNQ8WXF5 182 aa30.14■■■□□ 2.42
TMEM248-205ENST00000433271 PFASO15067 1338 aa30.14■■■□□ 2.42
TMEM248-205ENST00000433271 TLR2O60603 784 aa30.14■■■□□ 2.41
TMEM248-205ENST00000433271 SLC39A14Q15043 492 aa30.14■■■□□ 2.41
TMEM248-205ENST00000433271 LETM2Q2VYF4 491 aa30.14■■■□□ 2.41
TMEM248-205ENST00000433271 ANKRD35Q8N283 1001 aa30.14■■■□□ 2.41
TMEM248-205ENST00000433271 TMEM87AQ8NBN3 555 aa30.14■■■□□ 2.41
TMEM248-205ENST00000433271 CEP131Q9UPN4 1083 aa30.14■■■□□ 2.41
TMEM248-205ENST00000433271 STK38Q15208 465 aa30.13■■■□□ 2.41
TMEM248-205ENST00000433271 PTPAQ15257 358 aa30.13■■■□□ 2.41
TMEM248-205ENST00000433271 ZNF174Q15697 407 aa30.13■■■□□ 2.41
TMEM248-205ENST00000433271 PORCNQ9H237 461 aa30.13■■■□□ 2.41
TMEM248-205ENST00000433271 EDIL3O43854 480 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms